AT2G43980.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:cytosol 1.000 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : inositol 1,3,4-trisphosphate 5/6-kinase 4 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
inositol 1,3,4-trisphosphate 5/6-kinase 4 (ITPK4); FUNCTIONS IN: magnesium ion binding, inositol-1,3,4-trisphosphate 5/6-kinase activity, catalytic activity, ATP binding, inositol tetrakisphosphate 1-kinase activity; INVOLVED IN: inositol trisphosphate metabolic process; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Inositol-tetrakisphosphate 1-kinase, uncharacterised-N-terminal (InterPro:IPR017418), Inositol 1, 3, 4-trisphosphate 56-kinase (InterPro:IPR008656); BEST Arabidopsis thaliana protein match is: Inositol 1,3,4-trisphosphate 5/6-kinase family protein (TAIR:AT4G08170.2); Has 388 Blast hits to 384 proteins in 77 species: Archae - 0; Bacteria - 0; Metazoa - 95; Fungi - 0; Plants - 245; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr2:-:18208437..18211604 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 54183.50 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 5.07 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | 0.01 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Length | 488 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MKGVLLDESV LFSPESEDSS PSLRESVPSL LRLLRYSMIR TGISYGLDLP ENKVDLLRKT AAEYSINCLP LETSLTSVTF GDTLKAWYSD GSILYVASSR 101: KEEILRELSP SQLVVLLDVE GDSLEDPNII HIHSLEELPM TICCINKKAM GDGAAIVAYI MKPSRVEDFA KRGALPMYPT SCGLIFLPLM FEFPLASQLK 201: HADIIFHKAT DEILSIELNC SDSKSSVAVT FSTGMEKLKK YMEDQNACAI VDPIRNIYPV VDRLKMQHIL LGLEGLGAAG RKIRGACFLK IDSYDEPDLA 301: QNLSRAGLSL PCIVKPQVAC GVADAHSMAI VFRVEDFKNL NTPVPAIIQE YVDHSSRIFK FYVLGETIFH AVKKSIPSSS SLRKSAEENG LKPILFDSLK 401: SLPVDSANQN PVSEIDLELV TEAATWLRKK LDLTIFGFDV VIQEGTGDHV IVDLNYLPSF KEVPDNIAVP AFWEAIRNRF DQHVQEKH |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)