AT2G42450.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : alpha/beta-Hydrolases superfamily protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: Mono-/di-acylglycerol lipase, N-terminal;Lipase, class 3 (TAIR:AT3G14075.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:17672425..17674854 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 61653.60 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.58 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.36 | ||||||||||||||||||||||||||||||||||||
| Length | 546 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MANRALNRLL RNFFVESSPF RKRSGLYQGV VYNVIKRFQS HLSESGKVEK ELEEQEAEKR RPSSVTSSRS GLEKRRQFES GIDNDSSSDE DTGDGKWKLD 101: LAWLTKALEP AMQLRRWALP TGEKSLPGSR SLSEIIASIQ RSRLGIEGWT FGDLTIGLYL IYLRQASLSP FEDVKGVEVV SESTVYDLIY NAELAKGCYR 201: DSVSGLAKNT MLRENNILKF VKDSSVMRPG YYIGVDHRRK LVVFGIRGTH TIYDLITDIV SSSDEEVTFE GYSTHFGTAE AARWFLNHEL QTIRRCLAKY 301: EGYKLRLVGH SLGGAIASLM AIMLKKMPRE ELGFDAEIIS AVGYATPPCV SKELAENCSE FVTTIVMQDD IIPRLSAASL ARLRNEILQT DWTSVIEKEE 401: WKNVLDLVTN AKQVVTSVQD VARKVSDYAN FGNKKEVPEI PSSKNNQSGI LISDSTTKDV VKLPEELYVP GAVYYLMRSL RGTPKSSAGK QVEYYSLWKR 501: DPGQHFQRIL LSGNFITDHK CDSHYYALRD VLKGFPSFIN ESIFKK |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)