AT3G28700.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein of unknown function (DUF185) | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein of unknown function (DUF185); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF185 (InterPro:IPR003788); Has 3455 Blast hits to 3441 proteins in 877 species: Archae - 0; Bacteria - 1411; Metazoa - 158; Fungi - 104; Plants - 44; Viruses - 0; Other Eukaryotes - 1738 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:10759580..10761834 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 51982.80 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.72 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.32 | ||||||||||||||||||||||||||||||||
| Length | 471 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MLRKLLTQTS SRRLLFSGVP PLFSKSTISP FSSLSSSPEP PSSESPAVEH PGTTISIDRS SLYTPPDHSH ESTPDSELVK HLKSIIKFRG GPISVAEYME 101: EVLTNPKAGF YMNRDVFGAQ GDFITSPEVS QMFGEMIGVW TVCLWEQMGR PERVNLVELG PGRGTLMADL LRGTSKFKNF TESLHIHLVE CSPALQKLQH 201: QNLKCTDESS SEKKAVSSLA GTPVHWHATL QEVPSGVPTL IIAHEFYDAL PVHQFQKSTR GWCEKMVDVG EDSKFRFVLS PQPTPAALYL MKRCTWATPE 301: EREKMEHVEI SPKSMDLTQE MAKRIGSDGG GALIIDYGMN AIISDSLQAI RKHKFVNILD DPGSADLSAY VDFPSIKHSA EEASENVSVH GPMTQSQFLG 401: SLGINFRVDA LLQNCNDEQA ESLRAGYWQL VGDGEAPFWE GPNEQTPIGM GTRYLAMSIV NKNQGIPAPF Q |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)