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AT2G37450.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 0.947
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : nodulin MtN21 /EamA-like transporter family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
nodulin MtN21 /EamA-like transporter family protein; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT2G37460.1); Has 1785 Blast hits to 1597 proteins in 227 species: Archae - 16; Bacteria - 357; Metazoa - 0; Fungi - 0; Plants - 1369; Viruses - 0; Other Eukaryotes - 43 (source: NCBI BLink).
Protein Annotations
EnsemblPlants:AT2G37450EnsemblPlants:AT2G37450.1entrez:818322hmmpanther:PTHR31218
hmmpanther:PTHR31218:SF29Pfam:PF00892SUPFAM:0043518TMHMM:TMhelix
Coordinates (TAIR10) chr2:-:15722828..15724851
Molecular Weight (calculated) 32227.30 Da
IEP (calculated) 8.79
GRAVY (calculated) 0.63
Length 297 amino acids
Sequence (TAIR10)
(BLAST)
001: MACMKKALPF ILMVLLQIGY AGMDILTKDV LNKGMSIYVL SVYRHGVATV VMAPFAFYFD KLESVKFQSI RSAAKVVGTV TTVGGIMVMT LVKGPALDLF
101: WTKGPSAQNT VGTDIHSSIK GAVLVTIGCF SYACFMILQA ITLKTYPAEL SLATWICLIG TIEGVVVALV MEKGNPSVWA IGWDTKLLTI TYSGIVCSAL
201: GYYIGGVVMK TRGPVFVTAF KPLCMIVVAI MSSIIFDEQM YLGRALGATV ICVGLYLVIW GKAKDYEYPS TPQIDDDLAQ ATTSKQKEQR RTVIESV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)