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AT3G55630.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
peroxisome 0.878
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : DHFS-FPGS homolog D
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
DHFS-FPGS homolog D (DFD); CONTAINS InterPro DOMAIN/s: Folylpolyglutamate synthetase, conserved site (InterPro:IPR018109), Mur ligase, central (InterPro:IPR013221), Mur ligase, C-terminal (InterPro:IPR004101), Folylpolyglutamate synthetase (InterPro:IPR001645); BEST Arabidopsis thaliana protein match is: DHFS-FPGS homolog B (TAIR:AT5G05980.2); Has 7683 Blast hits to 7678 proteins in 2538 species: Archae - 43; Bacteria - 4846; Metazoa - 166; Fungi - 352; Plants - 132; Viruses - 0; Other Eukaryotes - 2144 (source: NCBI BLink).
Protein Annotations
EnsemblPlants:AT3G55630EnsemblPlants:AT3G55630.1entrez:824729gramene_pathway:6.3.2.17
gramene_pathway:PWY-2161gramene_pathway:PWY-2161B-PMNgramene_pathway:PWY-3742gramene_pathway:PWY-3841
gramene_plant_reactome:1119484gramene_plant_reactome:6873865hmmpanther:PTHR11136hmmpanther:PTHR11136:SF6
KEGG:00790+6.3.2.17Pfam:PF08245scanprosite:PS01012tair10-symbols:ATDFD
tair10-symbols:DFDtair10-symbols:FPGS3TIGRfam:TIGR01499unipathway:UPA00850
Coordinates (TAIR10) chr3:+:20636785..20639395
Molecular Weight (calculated) 52607.20 Da
IEP (calculated) 7.73
GRAVY (calculated) -0.22
Length 470 amino acids
Sequence (TAIR10)
(BLAST)
001: MATEDDGELS ARYQNTLDAL SSLITKRGRL ASNNQSHRFR LLFHYLKVLE LEDAVSQMKI IHVAGTKGKG STCTFAESIL RCYGLRTGLF TSPHLIDVRE
101: RFRLNGIEIS QEKFVNYFWC CFHKLKEKTS NEVDVVILEV GLGGRFDATN VIQKPVVCGI SSLGYDHMEI LGYTLAEIAA EKAGIFKSGV PAFTVAQPDE
201: AMRVLNEKAS KLEVNLQVVE PLDSSQRLGL QGEHQYLNAG LAVALCSTFL KEIGIEDKNG LDQTNGLPEK FISGLSNAYL MGRAMIVPDS ELPEEIVYYL
301: DGAHSPESME ACAIWFSKQI KQNQERNQKR SEQILLFNCM SVRDPSLLLP RLRSKCIDQG VDFKRAVFVP NVSVYNQVGS STNVGTRVES MSWQFGLQRI
401: WESLARGEAK SNSKSDSKGK EEEKSFVFSS LPVAVDWLRD NARQSKQVRF QVLVTGSLHL VGDLLRFIKK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)