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AT2G04790.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; Has 45 Blast hits to 45 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IZCIeggNOG:ENOG410XZ65EMBL:CP002685EnsemblPlants:AT2G04790
EnsemblPlants:AT2G04790.1entrez:815022ExpressionAtlas:F4IFB6GeneID:815022
Gramene:AT2G04790.1hmmpanther:PTHR36342PaxDb:F4IFB6Proteomes:UP000006548
RefSeq:NP_178556.2STRING:3702.AT2G04790.2TAIR:AT2G04790UniGene:At.41264
UniProt:F4IFB6
Coordinates (TAIR10) chr2:+:1679528..1680199
Molecular Weight (calculated) 16868.60 Da
IEP (calculated) 9.17
GRAVY (calculated) -0.02
Length 152 amino acids
Sequence (TAIR10)
(BLAST)
001: MASLFTPSPT TTSSSGDTIY VAAVPLKAAA GPPQLIMSMA YSLNISNLQH FMVLIKPSSP IRQEVLVFDF QPRNPESIEA AISLLSGNLI PGVVLQRRLK
101: NVPRQRCWMV GPSKGNDAME MAMEFNKSWE TDLRVGFHDC RHYTNGLVLY KL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)