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AT1G22430.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : GroES-like zinc-binding dehydrogenase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
GroES-like zinc-binding dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: GroES-like zinc-binding dehydrogenase family protein (TAIR:AT4G22110.2); Has 33980 Blast hits to 33961 proteins in 3177 species: Archae - 763; Bacteria - 21520; Metazoa - 1242; Fungi - 2509; Plants - 4182; Viruses - 3; Other Eukaryotes - 3761 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G22430-MONOMERBioCyc:ARA:GQT-2364-MONOMERBioGrid:24088EC:1.1.1.1
eggNOG:COG1062eggNOG:KOG0022EMBL:AC006551EMBL:AY093114
EMBL:AY128821EMBL:CP002684EnsemblPlants:AT1G22430EnsemblPlants:AT1G22430.1
EnsemblPlants:AT1G22430.2entrez:838849Gene3D:3.40.50.720Gene3D:3.90.180.10
GeneID:838849Genevisible:Q9SK86GO:GO:0004022GO:GO:0005737
GO:GO:0008270Gramene:AT1G22430.1Gramene:AT1G22430.2gramene_pathway:1.1.1.1
gramene_pathway:1.1.1.22gramene_pathway:ETOH-ACETYLCOA-ANA-PWYgramene_pathway:PWY-3801gramene_pathway:PWY-3821
gramene_pathway:PWY-4821gramene_pathway:PWY-5486gramene_pathway:PWY-6333gramene_pathway:PWY66-21
hmmpanther:PTHR11695hmmpanther:PTHR11695:SF492HOGENOM:HOG000294674InParanoid:Q9SK86
InterPro:IPR002085InterPro:IPR002328InterPro:IPR011032InterPro:IPR013149
InterPro:IPR013154InterPro:IPR016040iPTMnet:Q9SK86KEGG:ath:AT1G22430
KO:K00121OMA:THELNFKPANTHER:PTHR11695PaxDb:Q9SK86
Pfam:PF00107Pfam:PF08240Pfam:Q9SK86PhylomeDB:Q9SK86
PIR:D86357PRIDE:Q9SK86PRO:PR:Q9SK86PROSITE:PS00059
ProteinModelPortal:Q9SK86Proteomes:UP000006548RefSeq:NP_001031079.1RefSeq:NP_173659.1
scanprosite:PS00059SMR:Q9SK86STRING:3702.AT1G22430.1SUPFAM:SSF50129
SUPFAM:SSF51735TAIR:AT1G22430UniGene:At.41602UniProt:Q9SK86
Coordinates (TAIR10) chr1:+:7919235..7921594
Molecular Weight (calculated) 42531.40 Da
IEP (calculated) 6.50
GRAVY (calculated) 0.07
Length 388 amino acids
Sequence (TAIR10)
(BLAST)
001: MDKTFFSSNE GKPITCKAAI CRKAGEALVI EDIHVDPPQA YEVRIKILCT SLCHTDLTFW KLSFGPISRF PRILGHEAVG VVESIGENVD GFKQGDVVLP
101: VFHPYCEECK DCKSSKTNWC DRYAEDFISN TRRYGMASRF KDSSGEVIHH FLFVSSFSEY TVVDIAHLVK ISPEIPVDKA ALLSCGVSTG IGAAWKVANV
201: EEGSTIAIFG LGAVGLAVAE GARLRGAAKI IGIDTNSDKF ELGKKFGFTD FINPTLCGEK KISEVIKEMT EGGVDYSFEC VGLASLLNEA FISTRTGTGK
301: TVMLGMEKHA APISLGSFDL LRGRVICGSL FGGLKSKLDI PILVDHYLKK ELNLDSFITH ELNFKEINKA FALLEEGKSL RCILWMDK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)