AT2G36840.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.651 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : ACT-like superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
ACT-like superfamily protein; FUNCTIONS IN: amino acid binding; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid-binding ACT (InterPro:IPR002912); BEST Arabidopsis thaliana protein match is: ACT domain-containing protein (TAIR:AT2G39570.1); Has 798 Blast hits to 670 proteins in 149 species: Archae - 0; Bacteria - 272; Metazoa - 0; Fungi - 7; Plants - 430; Viruses - 0; Other Eukaryotes - 89 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:15451834..15453550 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 46049.50 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.00 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.06 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 410 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGILSDDVVI ISQSEKEGDP SVITINCPDK TGLGCDLCRI LLFFGLNIVR GDVSTDGKWC YLVFWVIGKP NTRWNLLKMR LVEASPSFSW AFGISRCYLS 101: DSESQPPKLP DLFLLKLACS DRTGLLYDVT EVLYKLEINI EKVKISTTPD GKVMDLFFVT DTRELLGTVK RRNEVYEYLR DAIGDSMISY DIELVGPEIT 201: ACSTSSSVAE TLFSSDVSGE HSSGLHTSSN VSIAVDNSLS SAHTLIHITC QDHKGLLYDI MRTFKDFNIQ ISYGRFTIKL GKNCEIDLFI VQSDGRKILD 301: SSKLNALITR LRAELQQPLR VVMMNRGPDT ELLVTNPVEL SGKGRPQVFH DIALALKKID TCIFSAEIGR HVTGDREWEV YKVLINEEDS LPIPRSKIEE 401: EVWKTLMGWE |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)