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AT1G33060.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : NAC 014
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
NAC 014 (NAC014); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC transcription factor-like 9 (TAIR:AT4G35580.2); Has 3016 Blast hits to 3007 proteins in 81 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 3006; Viruses - 5; Other Eukaryotes - 1 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IGNUeggNOG:ENOG410ZJITEMBL:CP002684EnsemblPlants:AT1G33060
EnsemblPlants:AT1G33060.1entrez:840202ExpressionAtlas:F4HPG6GeneID:840202
GO:GO:0003677GO:GO:0005634GO:GO:0006351GO:GO:0006355
GO:GO:0016021Gramene:AT1G33060.1hmmpanther:PTHR31989hmmpanther:PTHR31989:SF21
InterPro:IPR003441KEGG:ath:AT1G33060PaxDb:F4HPG6Pfam:PF02365
Pfscan:PS51005PhylomeDB:F4HPG6PRIDE:F4HPG6PROSITE:PS51005
ProteinModelPortal:F4HPG6Proteomes:UP000006548RefSeq:NP_174582.3SMR:F4HPG6
STRING:3702.AT1G33060.2SUPFAM:SSF101941TAIR:AT1G33060tair10-symbols:ANAC014
tair10-symbols:NAC014TMHMM:TMhelixUniGene:At.40004UniProt:F4HPG6
Coordinates (TAIR10) chr1:-:11975518..11978493
Molecular Weight (calculated) 73559.80 Da
IEP (calculated) 5.88
GRAVY (calculated) -0.73
Length 648 amino acids
Sequence (TAIR10)
(BLAST)
001: MNQIKNKTLP EMTTEQALLS MEALPLGFRF RPTDEELINH YLRLKINGRD LEVRVIPEID VCKWEPWDLP GLSVIKTDDQ EWFFFCPRDR KYPSGHRSNR
101: ATDIGYWKAT GKDRTIKSKK MIIGMKKTLV FYRGRAPRGE RTNWIMHEYR ATDKELDGTG PGQNPYVLCR LFHKPSDSCD PAHCEEIEKV NFTPTTTTRC
201: SPDDTSSEMV QETATSGVHA LDRSDDTERC LSDKGNNDVK PDVSVINNTS VNHAETSRAK DRNLGKTLVE ENPLLRDVPT LHGPILSEKS YYPGQSSIGF
301: ATSHMDSMYS SDFGNCDYGL HFQDGASEQD ASLTDVLDEV FHNHNESSND RKDFVLPNMM HWPGNTRLLS TEYPFLKDSV AFVDGSAEVS GSQQFVPDIL
401: ASRWVSEQNV DSKEAVEILS STGSSRTLTP LHNNVFGQYA SSSYAAIDPF NYNVNQPEQS SFEQSHVDRN ISPSNIFEFK ARSRENQRDL DSVVDQGTAP
501: RRIRLQIEQP LTPVTNKKER DADNYEEEDE VQSAMSKVVE EEPANLSAQG TAQRRIRLQT RLRKPLITLN NTKRNSNGRE GEASHRKEKE DISSSSSWQK
601: QKKSLVQFSS VVIIVAVIVV LVEIWKESRD AKCSFLFHQL DSFKGMFT
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)