suba logo
AT2G23460.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
nucleus 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : extra-large G-protein 1
Curator
Summary (TAIR10)
encodes a novel G-alpha protein that shares similarity to plant, yeast, and animal G-alpha proteins at the C-terminus. It contains an N-terminus that is as large as the C-terminus, is a member of a small family, and is expressed in all tissues examined, including roots, leaves, stems, flowers, and fruits.
Computational
Description (TAIR10)
extra-large G-protein 1 (XLG1); FUNCTIONS IN: signal transducer activity, guanyl nucleotide binding; INVOLVED IN: in 7 processes; LOCATED IN: nucleus; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Guanine nucleotide binding protein (G-protein), alpha subunit (InterPro:IPR001019), G protein alpha subunit, helical insertion (InterPro:IPR011025); BEST Arabidopsis thaliana protein match is: extra-large GTP-binding protein 3 (TAIR:AT1G31930.3); Has 3427 Blast hits to 3422 proteins in 394 species: Archae - 0; Bacteria - 2; Metazoa - 2220; Fungi - 618; Plants - 355; Viruses - 0; Other Eukaryotes - 232 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410XNVQeggNOG:KOG0082EMBL:AC003040EMBL:AF060941
EMBL:AF060942EMBL:AY054665EMBL:CP002685EnsemblPlants:AT2G23460
EnsemblPlants:AT2G23460.1entrez:816878Gene3D:1.10.400.10Gene3D:3.40.50.300
GeneID:816878Genevisible:O80462GO:GO:0003924GO:GO:0004871
GO:GO:0005525GO:GO:0005634GO:GO:0007186GO:GO:0046872
Gramene:AT2G23460.1hmmpanther:PTHR10218hmmpanther:PTHR10218:SF222HOGENOM:HOG000241648
InParanoid:O80462InterPro:IPR001019InterPro:IPR011025InterPro:IPR027417
iPTMnet:O80462KEGG:ath:AT2G23460OMA:QMFDDVRPANTHER:PTHR10218
PaxDb:O80462Pfam:O80462Pfam:PF00503PhylomeDB:O80462
PIR:T01135PIR:T51593PRIDE:O80462PRINTS:PR00318
PRO:PR:O80462PROSITE:PS00430ProteinModelPortal:O80462Proteomes:UP000006548
Reactome:R-ATH-399997Reactome:R-ATH-416476Reactome:R-ATH-416482Reactome:R-ATH-418555
Reactome:R-ATH-434316RefSeq:NP_565553.1SMART:SM00275SMR:O80462
STRING:3702.AT2G23460.1SUPFAM:SSF47895SUPFAM:SSF52540TAIR:AT2G23460
tair10-symbols:ATXLG1tair10-symbols:XLG1UniGene:At.48510UniGene:At.66350
UniProt:O80462
Coordinates (TAIR10) chr2:+:9995699..9998945
Molecular Weight (calculated) 98801.40 Da
IEP (calculated) 4.68
GRAVY (calculated) -0.32
Length 888 amino acids
Sequence (TAIR10)
(BLAST)
001: MPLKEDDCCL FAEEYDGPPL SYNIPCAVPI NVEKIPVAAV VSPVCISDNM SFPVIQPILS VESKKFLIDS VSPTSVIANC GSNQLELVSD SITVSPTSVI
101: EHTEEEEEEE GGDGEDCELS SSGELLLRSC SVKESLDLNE SSSNPLVPDW ESNESVLSMD YPSSRVTGDC VSETNGDGKK QPVVTFLGIA SDDGFEEEES
201: CSNLRRVRVV PVKKQPQTKG KKGSCYRCFK GSRFTEKEVC LVCDAKYCNS CVLRAMGSMP EGRKCVTCIG FPIDESKRGS LGKCSRMLKR LLNDLEVKQI
301: MKTERFCEAN QLPAEYVYVN GQPLYPEELV TLQTCSNPPK KLKPGDYWYD KVSGLWGKEG EKPYQIISPH LNVGGPISPE ASNGNTQVFI NGREITKVEL
401: RMLQLAGVQC AGNPHFWVNE DGSYQEEGQK NTKGYIWGKA GTKLLCAVLS LPVPSKSTAN ASGEQLYSAN SRSILDHLEH RTLQKILLVG NSGSGTSTIF
501: KQAKILYKDV PFLEDERENI KVIIQTNVYG YLGMLLEGRE RFEEEALALR NTKQCVLENI PADEGDAKSN DKTVTMYSIG PRLKAFSDWL LKTMAAGNLG
601: VIFPAASREY APLVEELWRD AAIQATYKRR SELGLLPSVA SYFLERAIDV LTPDYEPSDL DILYAEGVTS SSGLACLDFS FPQTASEENL DPSDHHDSLL
701: RYQLIRVPSR GLGENCKWID MFEDVGMVVF VVSMSDYDQV SEDGTNKMLL TKKLFESIIT HPIFENMDFL LILNKYDLLE EKVERVPLAR CEWFQDFNPV
801: VSRHRGSNNG NPTLGQLAFH FMAVKFKRFY SSLTGKKLFV SSSKSLDPNS VDSSLKLAME ILKWSEERTN ICMSEYSMYS TEPSSFSN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)