AT5G56790.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.849 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, active site (InterPro:IPR008266), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase protein with adenine nucleotide alpha hydrolases-like domain (TAIR:AT3G13690.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:22968610..22971391 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 74308.50 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.09 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.33 | ||||||||||||||||||||||||||||||||||||
| Length | 669 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MKQKGFKERG VVVGKKVMVA VRASKEIPKA ALLWTLTHVV QPGDRIRLLV VVPSNYTSKK IWGFSRFTSD CASGYGRFLA GTNSDRKDDI HESCSQMMFQ 101: LHNVYDAEKI NVRIKIVFAS LDGVIAAEAK KSNSNWVILD RGLKYEKKCC IEQLECNLVV IKKSQPKVLR LNLVKNADTE HPEAISRLAS KSVESRRSSR 201: TGKKLREPFV TPASSPDQEV SSHTDIGTSS ISSSDAGASP FLASRVFEGL KKENLWVNDG SKSFFESDSD SDGEKWSPLS MASSSSHPVT TADLLSPSGD 301: LSKAHTETPR KSRFAVLRLA LSRKEPEAGK EIRKPDSCLN KSVREVVSLS RKPAPGPPPL CTICQHKAPK FGNPPRWFTY SELETATKGF SKGSFLAEGG 401: FGSVHLGTLP DGQIIAVKQY KIASTQGDRE FCSEVEVLSC AQHRNVVMLI GLCVEDGKRL LVYEYICNGS LHSHLYGMGR EPLGWSARQK IAVGAARGLR 501: YLHEECRVGC IVHRDMRPNN ILLTHDFEPL VGDFGLARWQ PEGDKGVETR VIGTFGYLAP EYAQSGQITE KADVYSFGVV LVELITGRKA MDIKRPKGQQ 601: CLTEWARPLL QKQAINELLD PRLMNCYCEQ EVYCMALCAY LCIRRDPNSR PRMSQVLRML EGDVVMNPI |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)