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AT2G34150.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 0.976
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : SCAR family protein
Curator
Summary (TAIR10)
Encodes a member of the SCAR family.These proteins are part of a complex (WAVE) complex.The SCAR subunit activates the ARP2/3 complex which in turn act as a nucleator for actin filaments.
Computational
Description (TAIR10)
SCAR family protein; BEST Arabidopsis thaliana protein match is: SCAR family protein (TAIR:AT1G29170.1); Has 2566 Blast hits to 1216 proteins in 219 species: Archae - 0; Bacteria - 1126; Metazoa - 472; Fungi - 223; Plants - 222; Viruses - 2; Other Eukaryotes - 521 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IIJ0eggNOG:ENOG410XRBQEMBL:CP002685EnsemblPlants:AT2G34150
EnsemblPlants:AT2G34150.1entrez:817976ExpressionAtlas:F4IGW2GeneID:817976
GO:GO:0005856GO:GO:0030036Gramene:AT2G34150.1hmmpanther:PTHR12902
InterPro:IPR028288iPTMnet:F4IGW2PANTHER:PTHR12902PaxDb:F4IGW2
PRIDE:F4IGW2ProteinModelPortal:F4IGW2Proteomes:UP000006548RefSeq:NP_850225.1
SMR:F4IGW2STRING:3702.AT2G34150.2TAIR:AT2G34150tair10-symbols:ATRANGAP2
tair10-symbols:ATSCAR1tair10-symbols:SCAR1tair10-symbols:WAVE1UniGene:At.37845
UniProt:F4IGW2
Coordinates (TAIR10) chr2:-:14419432..14422361
Molecular Weight (calculated) 78393.60 Da
IEP (calculated) 4.48
GRAVY (calculated) -0.84
Length 700 amino acids
Sequence (TAIR10)
(BLAST)
001: MYDELPPFIM TPYEDCREPP RLHLLDKFDI NGPGSCLKRY SDPTHFKRAS RASKPSEIKK KKSIQRGRDI SRLASVANQS DRKTCTSLSF SGRTSTSKTA
101: STIEIESKSD LQEHRSFSFD SRSGGEKPKR VSSSSRFTPG SRTIASVLSE SESESDSPSQ DLTARGSSSV SWHEKAEIVE CNVLQCATDE APEVMETNFV
201: LDAEPVSRLK EHSAVEAVQD IKPKELEMDN EDETESEGDD FVDALYTIDS ESENDEAFQA TKEVQKNLYN DITEQETEKI SNNFSVDETK CAATSELHLS
301: SSPVYKSDEL IHQDPWAASE ISSGTHSYSN GFSNPLYDIS GIQEHQESEE VESSCDTESI KTWTNGNLLG LKPSKPKIIA ETIPEIVEDI DSETFQEHLR
401: EDYKAPFDWF TSSPPLDHMK ISFKSSETLP SSELQLKLPD EYTFSSFQLV PETIATSLPD SDSDKDTFCR SSSYISDNSD NDNRSVSMSE QQWEEESEGI
501: RESKRQQELY DSFHRVNAEA SSLPVPFPKI ETTNGCLVEN VSYLQNPAEP LPPPLPPLQW MVSKIPSAGF EDNNKQSLKD ALTQAFEKNN NSLTAVKKKE
601: PHIVTVSDPK LVTKVHLKNN VRDYKQSHGN TNETEAGDFL HQIRTKQFNL RRVVRTKTSS SETTMNTNIS VILEKANSIR QAVASDDGEG ESDTWSDSDT
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)