AT3G45850.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : P-loop containing nucleoside triphosphate hydrolases superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G28620.1); Has 65646 Blast hits to 44270 proteins in 2280 species: Archae - 809; Bacteria - 9619; Metazoa - 29444; Fungi - 5953; Plants - 4409; Viruses - 140; Other Eukaryotes - 15272 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:16855814..16860950 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 119015.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.89 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.63 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 1058 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MDSIQQRRGG IVSLSPAQTP RSSDKSARES RSSESNSTNR NDKEKGVNVQ VILRCRPLSE DEARIHTPVV ISCNENRREV AATQSIAGKH IDRHFAFDKV 0101: FGPASQQKDL YDQAICPIVF EVLEGYNCTI FAYGQTGTGK TYTMEGGARK KNGEFPSDAG VIPRAVKQIF DILEAQGAEY SMKVTFLELY NEEISDLLAP 0201: EETIKFVDEK SKKSIALMED GKGSVFVRGL EEEIVSTANE IYKILEKGSA KRRTAETLLN KQSSRSHSIF SITIHIKENT PEGEEMIKCG KLNLVDLAGS 0301: ENISRSGARE GRAREAGEIN KSLLTLGRVI NALVEHSGHI PYRDSKLTRL LRESLGGKTK TCVIATISPS IHCLEETLST LDYAHRAKNI KNKPEINQKM 0401: MKSAVMKDLY SEIDRLKQEV YAAREKNGIY IPKDRYIQEE AEKKAMAEKI ERLELQSESK DKRVVDLQEL YNSQQILTAE LSEKLEKTEK KLEETEHSLF 0501: DLEEKYRQAN ATIKEKEFVI SNLLKSEKSL VERAFQLRTE LESASSDVSN LFSKIERKDK IEDGNRFLIQ KFQSQLTQQL ELLHKTVASS VTQQEVQLKH 0601: MEEDMESFVS TKSEATEELR DRLSKLKRVY GSGIEALDNI AVKLDGNSQS TFSSLNSEVS KHSHELENVF KGFASEADML LQDLQSSLNK QEEKLITFAQ 0701: QQRKAHSRAV DTARSVSKVT VEFFKTLDTH ATKLTGIVEE AQTVNHKKLS EFENKFEECA ANEERQLLEK VAELLANSNA RKKNLVQMAV HDLRESASTR 0801: TTTLQHEMST MQDSTSSIKA EWSIHMEKTE SSHHEDTSAV ESGKKAMQEV LLNCLEKTEM SAHQWRKAQE SLVSLERNNV ASVDSIVRGG MDANENLRSQ 0901: FSTAVSSSLD VFDAANSSLL TSIDHSLQLD NDACTKVNSM IIPCCEDLIE LKSDHNHKII EITENAGKCL LDEYVVDEPS CSTPKKRPID IPSIESIEEL 1001: RTPASEELLR AFRDEKLSKQ ANGDAKQQQQ QQQQHLIRAS SLYEAAVSDS RYPLSAVN |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)