AT2G23360.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Plant protein of unknown function (DUF869) | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Plant protein of unknown function (DUF869); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF869, plant (InterPro:IPR008587); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF869) (TAIR:AT1G19835.2); Has 38218 Blast hits to 24021 proteins in 1620 species: Archae - 547; Bacteria - 4231; Metazoa - 19834; Fungi - 3463; Plants - 2306; Viruses - 121; Other Eukaryotes - 7716 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:9949420..9952727 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 101428.00 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.90 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.83 | ||||||||||||||||||||||||||||||||
| Length | 898 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MDHKAWPWKK KSMEKTVVES NGEVVADKIE LEHRVKSLND KLNSVEAESN KHETEAQEAI VGWEKTKAEV ASLKKKLDEA LNEKHRSEER SSHTDAGLKE 101: CVQQLRFVRE EQERRMHDAL TKASQEYERR LIVIKTELAG SGKRLAEAEG ENAQLSKALL AKNKTVEDLN RERDRIEVDF NSLVSSLESK EKENVSLRYE 201: VRVLEKELEL RNEEREFSRR TAEASHKLHL ENVKKVAKLE SECQRLRVLV RKRLPGPAAL SKMSNEVEML GRRRVNGSPH SPMIDSEKIN NLTEQLCLLE 301: EENKTLREAL NKKVSELQFS RNMYSRTASR LLEFESHLEE SSRGTNIEPS RSSNVSHEVS LASVTEFDND DKVSCADSWA SALLSELDNF KNKKEMGTSL 401: VGTPKAAEMK LMDDFAEMEK LAMVASTIDN RPGSSPICSS DSISATGPVE NESNENSSEA TKTSGTVYSL NPDASPKDDI KSDSLPQSLH IVLKAVMEHK 501: HITQRNTDEV LEDIRKALSS VNHSSFSTNH QETKTLTVED RLDMECNISK SIHRIIDVIE GVSLKDERHV SNRESERLSG YTARVLQWKT TELSSVLQRF 601: LQACYDLLDR KADMKKFAQE LSSVLEWMVN HCFSLQDVST MRDEIKKQFE WDESRSGSEV DIGIFRQVSE AEKLRTEDVS FLACKDQLIE DKPGNQNLSR 701: KTVEEEANDK TASASENELK LEEKQNMRTE LEIAAASEKL AECQETILNL GKQLKALTNS KETALLSETL MYDVTDKSNN LPDAQPSHET TKPEKRLTSQ 801: RSSLLDQMKA EDHNTGESKD QKPQAADKNG KGGNSSVYNE TIEALEQILL SDKSKGSDSN CFAIVPQKKT GGVKSLWRKL LGRNKKGKSK KVPNPFAN |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)