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AT3G50240.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 0.868
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : ATP binding microtubule motor family protein
Curator
Summary (TAIR10)
Encodes a kinesin-related protein.
Computational
Description (TAIR10)
KICP-02; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G47820.2); Has 66961 Blast hits to 44643 proteins in 2038 species: Archae - 551; Bacteria - 6888; Metazoa - 33106; Fungi - 5668; Plants - 4311; Viruses - 105; Other Eukaryotes - 16332 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-1120-MONOMEReggNOG:COG5059eggNOG:KOG0244EMBL:AB061676
EMBL:AL132976EMBL:CP002686EnsemblPlants:AT3G50240EnsemblPlants:AT3G50240.1
entrez:824186Gene3D:3.40.850.10GeneID:824186GO:GO:0003777
GO:GO:0005524GO:GO:0005871GO:GO:0005874GO:GO:0007018
GO:GO:0016887Gramene:AT3G50240.1hmmpanther:PTHR24115hmmpanther:PTHR24115:SF463
HOGENOM:HOG000030222InterPro:IPR001752InterPro:IPR019821InterPro:IPR027417
InterPro:IPR027640KEGG:ath:AT3G50240ncoils:CoilOMA:DFIETHE
PANTHER:PTHR24115PaxDb:Q9SNE3Pfam:PF00225Pfscan:PS50067
PhylomeDB:Q94LW7PIR:T45570PRINTS:PR00380PROSITE:PS00411
PROSITE:PS50067Proteomes:UP000006548Reactome:R-ATH-983189RefSeq:NP_566931.1
scanprosite:PS00411SMART:SM00129SMR:Q94LW7STRING:3702.AT3G50240.1
SUPFAM:SSF52540TAIR:AT3G50240tair10-symbols:KICP-02UniGene:At.35515
UniGene:At.71136UniProt:Q94LW7
Coordinates (TAIR10) chr3:-:18623380..18628784
Molecular Weight (calculated) 118768.00 Da
IEP (calculated) 8.09
GRAVY (calculated) -0.71
Length 1051 amino acids
Sequence (TAIR10)
(BLAST)
0001: MESHSSLSSS SSSSPPSSLS SESCCVKVAV NVRPLIGDEV TQGCRECVSV SPVTPQVQMG THPFTFDHVY GSNGSPSSLM FEECVAPLVD GLFHGYNATV
0101: LAYGQTGSGK TYTMGTGIKD GTKNGLIPQV MSALFNKIDS VKHQMGFQLH VSFIEILKEE VLDLLDSSVP FNRLANGTPG KVVLSKSPVQ IRESPNGVIT
0201: LSGATEVPIA TKEEMASCLE QGSLTRATGS TNMNNESSRS HAIFTITLEQ MRKISSISVV KDTVDEDMGE EYCCAKLHLV DLAGSERAKR TGSGGVRLKE
0301: GIHINRGLLA LGNVISALGD EKRRKEGAHV PYRDSKLTRL LQDSLGGNSK TVMIACISPA DINAEETLNT LKYANRARNI QNKPVANKDL ICSEMQKMRQ
0401: ELQYLQATLC ARGATSSEEV QVMREKIMKL ESANEELSRE LHIYRSKRVT LDYCNIDAQE DGVIFSKDDG LKRGFESMDS DYEMSEATSG GISEDIGAAE
0501: EWEHALRQNS MGKELNELSK RLEEKESEMR VCGIGTETIR QHFEKKMMEL EKEKRTVQDE RDMLLAEVEE LAASSDRQAQ VARDNHAHKL KALETQILNL
0601: KKKQENQVEV LKQKQKSEDA AKRLKTEIQC IKAQKVQLQQ KMKQEAEQFR QWKASQEKEL LQLKKEGRKT EHERLKLEAL NRRQKMVLQR KTEEAAMATK
0701: RLKELLEARK SSPHDISVIA NGQPPSRQTN EKSLRKWLDN ELEVMAKVHQ VRFQYEKQIQ VRAALAVELT SLRQEMEFPS NSHQEKNGQF RFLSPNTRLE
0801: RIASLESMLD VSSNALTAMG SQLSEAEERE HSLHAKPRWN HIQSMTDAKY LLQYVFDSTA EARSKIWEKD RDIKEKKEQL NDLLCLLQLT EVQNREILKE
0901: KKTREQTVSI ALASTSSSYS GSSRSSSKHY GDNNASDDPS SPSSTYHRAT KHLKYTGPGI VNISVRESEA LLEETRKMKA MKKMGQSGKL WKWKRSHHQW
1001: LLQFKWKWQK PWKLSEWIKQ NDETTMHVMS KSHHDDEDDH SWNRHSMFQG A
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)