AT5G26910.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G58650.1); Has 1322 Blast hits to 684 proteins in 162 species: Archae - 4; Bacteria - 497; Metazoa - 157; Fungi - 101; Plants - 155; Viruses - 0; Other Eukaryotes - 408 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:-:9466169..9469523 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 94991.70 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 6.92 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.69 | ||||||||||||||||||||||||||||
| Length | 853 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEVVERKRSR GGFLNLFDWH GKSRKKLFSG STSELSEESK QPAQNLLKSR VSLIEVDEIG KSSSNNQRSD SSCCASSVTS DDGQGTRAPS VVARLMGLES 101: LPVPNVQEPR LNPDLDPFLL RPSQNTNRWD AYENLGYVNL RSDYDGISWD HLDSRTNNGR NQPIERFQSE TFPPRSAKPI CVTNNRHLSP IRSPGFVPSR 201: NPIYVMEAAS RMIEPSPRMV ARTRFSPSNS PSSVPMRIQD LREKLEAAQK VSSRQNSNDT FNLKYPSGKH NEKRITTSLT TPSTSKFMGK SSTDGLKGKV 301: KPSYVSAQAK AGTTPLSVTR NSANQKEKAD AKKCVVKSQN ALRGAPISMG KNMFKQNNQK QNCRDNQPSM TSVLNQKSSK VNNKVVNKVP VESGSISKQL 401: GLSTASAEKN TSLSLSRKKT LPRSKKLPNG MQKSGISDDK RTKRSENMIK CNITIDGGLN KGKDDRKKEM DVISFTFSSP IKGLSSDSLS STQGIGQDTD 501: SAVSFNIGGD SLNALLEQKL RELTSKLESS SCSLTQEEPS YSIPMDEMNG MISFSSEYEK STQNGLRKVL SESESVSDCT SFYDKQKFQI QAEEHEVSSI 601: STVTEADDLR SSCSKGFSDC RQTAEYGTIQ SSSDQELTWV SLNESHQAQD ESELSESVVT LSYSEAEERL DWEFEYISEI LGSDQLMVKE YALGMATDVL 701: PASLFDEMEG RGEVTAAKIK RKTLFDFVNK CLALRCEQMF MGSCRGLLGK GGFLFEQRDW LAEELNREIH GLKKMREMMM DELVDKEMSS FEGRWLDFER 801: ETYEEGIDIE GEIVSTLVDD LVNDLVSGTQ RRTLRQREGV VSALVEPHLL SAF |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)