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AT2G30020.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Protein phosphatase 2C family protein
Curator
Summary (TAIR10)
Encodes AP2C1. Belongs to the clade B of the PP2C-superfamily. Acts as a MAPK phosphatase that negatively regulates MPK4 and MPK6.
Computational
Description (TAIR10)
Protein phosphatase 2C family protein; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT1G07160.1); Has 6969 Blast hits to 6779 proteins in 496 species: Archae - 2; Bacteria - 405; Metazoa - 1770; Fungi - 794; Plants - 2680; Viruses - 9; Other Eukaryotes - 1309 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G30020-MONOMERBioGrid:2903EC:3.1.3.16eggNOG:COG0631
eggNOG:KOG0698EMBL:AC004680EMBL:AF370594EMBL:CP002685
EnsemblPlants:AT2G30020EnsemblPlants:AT2G30020.1entrez:817553ExpressionAtlas:O80871
Gene3D:3.60.40.10GeneID:817553Genevisible:O80871GO:GO:0004722
GO:GO:0005634GO:GO:0009536GO:GO:0009611GO:GO:0009620
GO:GO:0009738GO:GO:0046872GO:GO:0050832Gramene:AT2G30020.1
hmmpanther:PTHR13832hmmpanther:PTHR13832:SF117HOGENOM:HOG000233896InParanoid:O80871
InterPro:IPR000222InterPro:IPR001932InterPro:IPR015655KEGG:ath:AT2G30020
OMA:CSVAVCNPANTHER:PTHR13832PaxDb:O80871Pfam:O80871
Pfam:PF00481Pfscan:PS51746PhylomeDB:O80871PIR:T02483
PRIDE:O80871PRO:PR:O80871PROSITE:PS01032PROSITE:PS51746
ProteinModelPortal:O80871Proteomes:UP000006548RefSeq:NP_180563.1scanprosite:PS01032
SMART:SM00332SMR:O80871STRING:3702.AT2G30020.1SUPFAM:SSF81606
TAIR:AT2G30020UniGene:At.19796UniProt:F6LPR5UniProt:O80871
Coordinates (TAIR10) chr2:+:12814437..12815904
Molecular Weight (calculated) 42422.30 Da
IEP (calculated) 7.92
GRAVY (calculated) -0.26
Length 396 amino acids
Sequence (TAIR10)
(BLAST)
001: MSCSVAVCNS PVFSPSSSLF CNKSSILSSP QESLSLTLSH RKPQTSSPSS PSTTVSSPKS PFRLRFQKPP SGFAPGPLSF GSESVSASSP PGGVLKRKRP
101: TRLDIPIGVA GFVAPISSSA AVAATPREEC REVEREGDGY SVYCKRGRRE AMEDRFSAIT NLHGDRKQAI FGVYDGHGGV KAAEFAAKNL DKNIVEEVVG
201: KRDESEIAEA VKHGYLATDA SFLKEEDVKG GSCCVTALVN EGNLVVSNAG DCRAVMSVGG VAKALSSDHR PSRDDERKRI ETTGGYVDTF HGVWRIQGSL
301: AVSRGIGDAQ LKKWVIAEPE TKISRIEHDH EFLILASDGL WDKVSNQEAV DIARPLCLGT EKPLLLAACK KLVDLSASRG SSDDISVMLI PLRQFI
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)