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AT3G45870.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.940
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data
Description (TAIR10) protein_coding : nodulin MtN21 /EamA-like transporter family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
nodulin MtN21 /EamA-like transporter family protein; LOCATED IN: membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT4G19185.1); Has 4395 Blast hits to 4381 proteins in 778 species: Archae - 43; Bacteria - 2750; Metazoa - 6; Fungi - 3; Plants - 1202; Viruses - 0; Other Eukaryotes - 391 (source: NCBI BLink).
Protein Annotations
BioGrid:9050eggNOG:ENOG410IH5EeggNOG:ENOG4110YP2EMBL:AL162459
EMBL:BT020265EMBL:BT020559EMBL:CP002686EnsemblPlants:AT3G45870
EnsemblPlants:AT3G45870.1entrez:823730GeneID:823730Genevisible:Q5PP32
GO:GO:0005886GO:GO:0006810GO:GO:0016021GO:GO:0022857
GO:GO:0055085hmmpanther:PTHR31218hmmpanther:PTHR31218:SF57HOGENOM:HOG000237441
InParanoid:Q5PP32InterPro:IPR000620InterPro:IPR030184KEGG:ath:AT3G45870
OMA:WKAHVAMPANTHER:PTHR31218PaxDb:Q5PP32Pfam:PF00892
Pfam:Q5PP32PhylomeDB:Q5PP32PIR:T47527PRIDE:Q5PP32
PRO:PR:Q5PP32ProteinModelPortal:Q5PP32Proteomes:UP000006548RefSeq:NP_001078246.1
RefSeq:NP_190173.2STRING:3702.AT3G45870.1SUPFAM:0043518TAIR:AT3G45870
TMHMM:TMhelixUniGene:At.43850UniGene:At.53778UniProt:Q5PP32
Coordinates (TAIR10) chr3:+:16867246..16868838
Molecular Weight (calculated) 41882.50 Da
IEP (calculated) 9.38
GRAVY (calculated) 0.48
Length 385 amino acids
Sequence (TAIR10)
(BLAST)
001: MESTVEREAW KAHVAMIGVQ LFNGGYHVIT KVALNVGVNQ LVFCVFRDLI ALSILAPLAY IRDKRTRPPL NRQFLLAFFF LGLTGIFGNQ LLFLIGLNYT
101: NPTYAAAIQP SIPVFTFILA LIMGTERLNL FKLEGQAKVG GTLICVAGAV LMVLFRGLAL FGETEAESLG HGESRHTETS GHFMSGFFNG LGRWNLGVLC
201: LIGNCTCMAA FLAIQAPVLK KYPANLSVTA YSYFFGTMFM VTSAFFMTNE STNWSLTRSE FFAVVYAGVI ASALNYGLLT WSNKILGPSL VALYNPLQPA
301: ASAFLSRIFL GSPIYLGSIL GGCAIIAGLY SVTWASYKEK KAAAAMAVIP ITSKEAEPLI YKDHKNKPIG HLFTKSPISS PKSDD
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)