AT2G22560.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.702 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Kinase interacting (KIP1-like) family protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Kinase interacting (KIP1-like) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: KIP1-like (InterPro:IPR011684); BEST Arabidopsis thaliana protein match is: Kinase interacting (KIP1-like) family protein (TAIR:AT5G10500.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:9585892..9588838 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 108177.00 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.73 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.86 | ||||||||||||||||||||||||||||||||||||
| Length | 947 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MLQRAASNAY SWWWASHIRT KQSKWLEQNL QDIEEKVQYV LKLLQEDGDS FAKRAEMYYK KRPELISFVE ESYRAYRALA ERYDHISTEL QNANTTIASV 101: FPDQVPNFAM DDDIDMSKFA KRSNISGANV PNVPKLPVKD LKSAVRVATK KLQPRKSMKY TGGSTNVVVK SSGLSKPEAM GEIDKLQKEI LALQTEKEFV 201: KSSYEIGLSK YWEFEKGIKE KQERICGLQD EFGESVAIED EEARRLMTET AIKSCQEKLV ELQEKQEKSY EEAREEHVKI KESKEKLRSM ASQFLGDESV 301: FAKDDGDEVR RTAELDHEIK EMSRKKKELE SVKEKIREHF ESGANSSLNG TDMAEKVDEL VNKVISLESA VSSQTALIQR LRNETNGLQT QISTLETDKA 401: LLADDKSDLR NKLKEMEEKL KALQDLDRNV LDKSSNLQTH FDDACHNLDN LSGGNLHEVK PESESDNLAI SIEPQKDLEG EKRTLDISEE IKEHQKETGE 501: EKKEAPVKSV KFEQTRNATI AEDSTIPSTN PDTVLESTEK VDSDLEKQDA SDKTDSVLDN VLENQAASDQ TDSVLDSVLE KQGESDKIDS VPSNVSEKES 601: DISFNGEQQE DQKEKEGEPD WKEMFMKGME NREKHLLTEY TTILRNFKDM KKTLDETKTK MKTENATKDD EIKLLREKMS LLQKGLGDSN DLMENQLSND 701: DYSIGFMAAE NQNMSLVEEQ FRLNIDELLE ENLDFWLRFS TAFGQIQSYD TSIEDLQAEI SKLEQRRKQD GSSTAKYALR SDVRPLYVHL REINTDLGLW 801: LEKGAALKEE LKSRFESLCN IQDEITKALK SSAEDDDFRF TSYQAAKFQG EVLNMKQENN KVADELQAGL DHITTLQLEV DKTLGKLIDE FALSGSKNKS 901: DLDLQHSDSR SRVPLRSFIF GSKQKRAKPS IFSCMHPSLY RKMKTST |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)