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AT4G35500.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 0.692
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein kinase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G17530.3); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G35500-MONOMERBioCyc:ARA:GQT-407-MONOMEReggNOG:ENOG410XRBHeggNOG:KOG1290
EMBL:AK118939EMBL:AL031135EMBL:AL161587EMBL:BT005403
EMBL:CP002687EnsemblPlants:AT4G35500EnsemblPlants:AT4G35500.1entrez:829702
ExpressionAtlas:O81783GeneID:829702GO:GO:0004674GO:GO:0005524
Gramene:AT4G35500.1hmmpanther:PTHR24055hmmpanther:PTHR24055:SF138HOGENOM:HOG000171558
InterPro:IPR000719InterPro:IPR008271InterPro:IPR011009InterPro:IPR017441
KEGG:ath:AT4G35500Pfam:PF00069Pfscan:PS50011PhylomeDB:O81783
PIR:T04655PROSITE:PS00107PROSITE:PS00108PROSITE:PS50011
Proteomes:UP000006548RefSeq:NP_195275.1scanprosite:PS00107scanprosite:PS00108
SMART:SM00220SMR:O81783STRING:3702.AT4G35500.2SUPFAM:SSF56112
TAIR:AT4G35500UniGene:At.2404UniProt:O81783
Coordinates (TAIR10) chr4:+:16857475..16859407
Molecular Weight (calculated) 49309.20 Da
IEP (calculated) 7.50
GRAVY (calculated) -0.44
Length 438 amino acids
Sequence (TAIR10)
(BLAST)
001: MSCSSSSGSE GEEEGFDAYR KGGYHAVRIG DPFSGGRYIA QRKLGWGQFS TVWLAYDTLT STYVALKIQK SAQQFAQAAL HEIEFLSAAA DGDLDKTKCV
101: VRLIDHFKHS GPNGQHLCMV LEFLGDSLLR LIRYNQYKGL KLNKVREICR CILTGLDYLH RELGMIHSDL KPENILLCST IDPAKDPVRS GLTPLLEKPE
201: GNANGGASTM NLIEKKLKRR AKRAVAKISE RRVSMVTGEE ASSKTEKSLD GIDMRCKVVD FGNACWADKQ FAEEIQTRQY RAPEVILKSG YSFSVDMWSF
301: GCTAFELVTG DMLFAPKDGN GYGEDEDHLA LMMELLGKMP RKIAIGGAKS KDYFDRHGDL KRIRRLKYWP LDRLLIDKYK LPEAEAKEFA EFLTPILEFA
401: PEKRPTAQQC LDHPWMNVTT QNDAENVDDQ MNNLHIKG
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)