suba logo
AT3G01640.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
cytosol 1.000
ASURE: cytosol
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:21166475 (2011): cytosol
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : glucuronokinase G
Curator
Summary (TAIR10)
AtGlcAK is a sugar kinase able to phosphorylate D-GlcA to D-GlcA-1-phosphate in the presence of ATP.
Computational
Description (TAIR10)
glucuronokinase G (GLCAK); FUNCTIONS IN: poly(U) RNA binding, glucuronokinase activity, ATP binding; INVOLVED IN: cell wall biogenesis, inositol metabolic process, pollen tube development; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mevalonate/galactokinase (InterPro:IPR006206), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), GHMP kinase (InterPro:IPR006204), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), GHMP kinase, C-terminal (InterPro:IPR013750); BEST Arabidopsis thaliana protein match is: GHMP kinase family protein (TAIR:AT5G14470.1); Has 420 Blast hits to 420 proteins in 152 species: Archae - 38; Bacteria - 195; Metazoa - 13; Fungi - 2; Plants - 68; Viruses - 0; Other Eukaryotes - 104 (source: NCBI BLink).
Protein Annotations
BioCyc:MetaCyc:AT3G01640-MONOMERBRENDA:2.7.1.43DNASU:819902EC:2.7.1.43
eggNOG:ENOG410IE40eggNOG:ENOG410XWREEMBL:AC009325EMBL:AY057630
EMBL:AY141995EMBL:CP002686EMBL:GU599900EnsemblPlants:AT3G01640
EnsemblPlants:AT3G01640.1entrez:819902Gene3D:3.30.230.10Gene3D:3.30.70.890
GeneID:819902Genevisible:Q93ZC9GO:GO:0005524GO:GO:0005829
GO:GO:0006020GO:GO:0008266GO:GO:0042546GO:GO:0046872
GO:GO:0047940GO:GO:0048868Gramene:AT3G01640.1gramene_pathway:2.7.1.43
gramene_pathway:PWY-4841gramene_plant_reactome:1119431gramene_plant_reactome:6874438hmmpanther:PTHR10457
hmmpanther:PTHR10457:SF13HOGENOM:HOG000243720InParanoid:Q93ZC9InterPro:IPR006204
InterPro:IPR006206InterPro:IPR013750InterPro:IPR014721InterPro:IPR020568
KEGG:00052+2.7.1.6KEGG:00520+2.7.1.6KEGG:ath:AT3G01640KO:K16190
OMA:KVEVRPNPANTHER:PTHR10457PaxDb:Q93ZC9Pfam:PF00288
Pfam:Q93ZC9PhylomeDB:Q93ZC9PRIDE:Q93ZC9PRINTS:PR00959
PRO:PR:Q93ZC9ProteinModelPortal:Q93ZC9Proteomes:UP000006548RefSeq:NP_566144.2
SABIO-RK:Q93ZC9STRING:3702.AT3G01640.1SUPFAM:SSF54211SUPFAM:SSF55060
TAIR:AT3G01640tair10-symbols:ATGLCAKtair10-symbols:GLCAKUniGene:At.22984
unipathway:UPA00214UniProt:Q93ZC9
Coordinates (TAIR10) chr3:+:239418..241198
Molecular Weight (calculated) 40078.30 Da
IEP (calculated) 6.57
GRAVY (calculated) -0.09
Length 362 amino acids
Sequence (TAIR10)
(BLAST)
001: MDPNSTVSGD GQATAAIEHR SFARIGFLGN PSDVYFGRTI SLTIGNFWAS VKLEPSEHLV IKPHPFHDLV QFTSLDHLLN RLQNEGYYGG VRLLMAICKV
101: FRNYCKENDI QLHQANFSLS YDTNIPRQTG LSGSSAIVSA ALNCLLDFYN VRHLIKVQVR PNIVLSAEKE LGIVAGLQDR VAQVYGGLVH MDFSKEHMDK
201: LGHGIYTPMD ISLLPPLHLI YAENPSDSGK VHSMVRQRWL DGDEFIISSM KEVGSLAEEG RTALLNKDHS KLVELMNLNF DIRRRMFGDE CLGAMNIEMV
301: EVARRVGAAS KFTGSGGAVV VFCPEGPSQV KLLEEECRKA GFTLQPVKIA PSCLNDSDIQ TL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)