AT5G17910.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:golgi 0.752 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G29620.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:5927906..5932292 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 149607.00 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 3.93 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.84 | ||||||||||||||||||||||||||||
| Length | 1342 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MISDRSEFRV QIRRLFMIMI RTSYKWICNH PFLLGFVAFL YYLHRYCPLL FAPLVTASPV LVCTFVLLGT ILSFGEPNIP EIEKDPEIFH EAAPLRTEVS 0101: RDANVTVVDR GGDESFTVES FVGAEKVVLE DGNDDAERLV DSQFSEVEDD GRPFDYRPLV DETLDEIKRD THVRFEEKAF ILDVEKKGDR EDEKLIENDG 0201: TGAEQSRTNG SLYERMDDQM DVSPVSPWRP MRHEEDEDDD ADRDDSLDSG SDGAESSSPD ASMTDIIPML DELHPLLLSE APTRGIVDGE GSDAASEGPH 0301: RSSSDEGMES DGDSESHGEE GDNENEDEEE DEEEEDEEEK QEKKEDKDDE SKSAIKWTEA DQRNVMDLGS LELERNQRLE NLIARRRARH NMRLMAERNL 0401: IDFDSADIPF NMPPISTARH NPFDVSYDSY DDMPIPGSAP SIMFARRNPF DLPYEPNEEK PDLKGDGFQE EFSSQQPKDP MFRRHESFSV GPSMLGGPRH 0501: DRLRPFFVLE RLANEGTSYY PFERQLSEVS ESKVSSIPDT ESVCTVLEDD EKKVDENNAD RETKIAKVDM VSDNDEENNH SASDHDEENS HSASDHDEEK 0601: SHSSEDSDFD EQADSKKLHH DVAEIVLGSG ETHHEQSDMM EGETSDKGKL DEVSDSDSSL SEKEEKIRDI SEDEAMLISE QVVDLHEELG ASSLPSFGEL 0701: EINMARGVED DYHHDEARAE ESFITAHPSL DESAIHVLCG LGDGDHEEPV YDSSPPSGSR FPSFSSVSSD YKPDLPEKNG EEIEENEEKE REVYSESIGP 0801: EEIHSTSNET ETRTSEVGEN SMHVTGEASL VMREHSTPLE ESPDVVHDIA ETSVNKSVVE EIMYEEEEAQ KQKDEVSPQT FNADIPIDSY ASLSSGAVEY 0901: VETHSFNDED VAQLEQEPVH SLVHDAEEET HNDQTMDIEV DSVNASAQNV GSEETSPSES DRELTWSDKS VVEQSSLEPG DDQVPTRAGP VSVVFSRNIT 1001: FHEYHDAPED TTELSCLTSD TSSSPTESPE YTTPMVGEGS RAEFFQEDIY EELDHVVERL EQLTDLHAIS QSPPEIITEE ADEIKEIDEG LLSELDSIGD 1101: FNVKEVVTDT EPGPSSIENA MNQAVVESME KQPKSPQSDS RSGEIMCAVE TKPSESSVDE SSIDETNVIT TSDVLPVVAR SLEEFPQPSE PKEGISMEII 1201: SESVMIPTEA TGPGNVTVID EVVTEETKAE TTEKEEEGEE EEESKPKEIT KSDVLLVETR ALEEFPKPSE LKKGMAMEVI SEGVVIPTKA AGPSNVTLSD 1301: EVVTEKAKAE TTASNTDANV QSPESKETPE NSVETIAEQK GK |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)