AT1G03080.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.998 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : kinase interacting (KIP1-like) family protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
kinase interacting (KIP1-like) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prefoldin (InterPro:IPR009053), KIP1-like (InterPro:IPR011684); BEST Arabidopsis thaliana protein match is: Kinase interacting (KIP1-like) family protein (TAIR:AT3G22790.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:731794..737332 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 198561.00 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.72 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.70 | ||||||||||||||||||||||||||||||||||||
| Length | 1733 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MTAVVNGNSK RYSWWWDSHI SPKNSKWLQE NLTDMDSKVK QMIKVIEEDA DSFARRAEMY YKKRPELMKL VEEFYRAYRA LAERYDHATG VIRHAQQTMA 0101: EAFPNQDPMM FGEESPLGSS TDGFDPQTPD SYPPIRAPVY PDDLRKGAFG ISSSHLSTVK RNIAFMEDPQ SVSSGKGFKT AKARKGLNFN NVDGKEINAK 0201: VLSESERASK AEAEIVALKD ALSKVQAEKE ASLAQFDQNL EKLSNLESEV SRAQEDSRVL IERATRAEAE VETLRESLSK VEVEKESSLL QYQQCLQNIA 0301: DLEDRISLAQ KEAGEVDERA NRAEAETLAL KQSLVSSETD KEAALVQYQQ CLKTISNLEE RLHKAEEDSR LTNQRAENAE GEVESLKQKV SKLIEENEAY 0401: ELQYQQCLDT IADLKLKLFH AQEETQRLSR EIEDGVAKLK FAEEKCVVLE RSNQNLHSEL DGLLEKLGNQ SHELTEKQKE LGRLWTCVQE ENLRFMEAET 0501: AFQTLQQLHS QSQEELSTLA LELQNRSQIL KDMEARNNGL QEEVQEAKDQ SKSLNELNLS SAASIKSLQE EVSKLRETIQ KLEAEVELRV DQRNALQQEI 0601: YCLKEELSQI GKKHQSMVEQ VELVGLHPES FGSSVKELQE ENSKLKEIRE RESIEKTALI EKLEMMEKLV QKNLLLENSI SDLNAELETI RGKLKTLEEA 0701: SMSLAEEKSG LHSEKDMLIS RLQSATENSK KLSEENMVLE NSLFNANVEL EELKSKLKSL EESCHLLNDD KTTLTSERES LLSHIDTMRK RIEDLEKEHA 0801: ELKVKVLELA TERESSLQKI EELGVSLNAK DCEYASFVQF SESRMNGMES TIHHLQDENQ CRVREYQVEL DRAHDAHIEI IVLQKCLQDW LEKSSSLIAE 0901: NQDIKEASKL LEKLVSELEE ENIGKQVQID SSINCIKILR TGIYQVLMKL EIIPGIGSGD ENSRDQRNMH DILNRLEDMQ TMLLSIRDEN QHSAIENLVL 1001: IEFLRQLKSE AVGIETEKKI LEEELESQCQ QLSFSRDETQ KLIFVNGELT TKVNQGVNRE KVLMVEIEDF HRQVLQLRDD YTILQGDNNK TLDEKAYLTK 1101: STLQLEEEKC KLEDDISLLL SETIYQSNLI ILLEDVILEK LSGAMKLNED LDRLSIVKCK LEEEVRELGD KLKSADIANF QLQVVLEKSN AELLSARSAN 1201: VHLEHEIANV KVQKEKELLE AMLMISIMQN EKSELSKAVE GLECRYKEAK AIEEDRDKQV LRLRGDYDEQ VKKNSHSNEA NLKLEADLMN LLMELEEIKV 1301: EKENLNQELF TERNEIELWE SQSATLFGEL QISAVHETLL EGLTNELVEA CKNLESRSTL KDREIEQLKG RVNNLEDANK GQNDLMCKYA QAIFLLKESI 1401: QSLEKHAMLH EFENGPATET ASLVDNSDGF LEIQELHLRI KAIEEAITKK LAMEELKTSS ARRSRRRNGS LRKQNHEIYS EETEMITKDI VLDQVSDCSS 1501: YGISTRDILK IEDDHSLEAK SQNPPKGKSL SEESLVVDKL EISDRFTDPN KDANKRKVLE RLNSDLQKLS NLHVAVEDLK IKVETEEKDE KGKENEYETI 1601: KGQINEAEEA LEKLLSINRK LVTKVQNGFE RSDGSKSSMD LDENESSRRR RISEQARRGS EKIGRLQLEI QRLQFLLLKL EGDREDRAKA KISDSKTRIL 1701: LRDYIYSGVR GERRKRIKKR FAFCGCVQPP PSP |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)