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AT2G16870.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 0.989
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Disease resistance protein (TIR-NBS-LRR class) family
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: signal transduction, apoptosis, defense response, innate immune response; LOCATED IN: intrinsic to membrane; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT1G64070.1); Has 20392 Blast hits to 15740 proteins in 660 species: Archae - 17; Bacteria - 1396; Metazoa - 2110; Fungi - 75; Plants - 16264; Viruses - 0; Other Eukaryotes - 530 (source: NCBI BLink).
Protein Annotations
eggNOG:COG4886eggNOG:ENOG410IGA8EMBL:AC005167EMBL:CP002685
EnsemblPlants:AT2G16870EnsemblPlants:AT2G16870.1entrez:816188Gene3D:3.40.50.10140
Gene3D:3.40.50.300Gene3D:3.80.10.10GeneID:816188GO:GO:0005524
GO:GO:0007165GO:GO:0043531Gramene:AT2G16870.1hmmpanther:PTHR11017
hmmpanther:PTHR11017:SF20HOGENOM:HOG000064702InterPro:IPR000157InterPro:IPR002182
InterPro:IPR003593InterPro:IPR011713InterPro:IPR011991InterPro:IPR027417
InterPro:IPR032675KEGG:ath:AT2G16870OMA:LANDTTWPfam:PF00931
Pfam:PF01582Pfam:PF07725Pfscan:PS50104PhylomeDB:Q9ZVX6
PIR:C84545PROSITE:PS50104Proteomes:UP000006548RefSeq:NP_179279.1
SMART:SM00255SMART:SM00382SMR:Q9ZVX6STRING:3702.AT2G16870.1
SUPFAM:SSF46785SUPFAM:SSF52058SUPFAM:SSF52200SUPFAM:SSF52540
TAIR:AT2G16870UniGene:At.52775UniProt:Q9ZVX6
Coordinates (TAIR10) chr2:-:7308077..7311686
Molecular Weight (calculated) 125688.00 Da
IEP (calculated) 6.80
GRAVY (calculated) -0.23
Length 1109 amino acids
Sequence (TAIR10)
(BLAST)
0001: MASSSSSRTW NYRVFASFHG PDVRKSFLSH FRKQFICNGI TMFDDQKIVR SQTIAPSLTQ GIRESKISIV ILSKNYASST WCLNELLEIL KCREDIGQIV
0101: MTVFYGVDPS DVRKQTGEFG TVFNKTCARR TEKERRNWSQ ALNVVGNIAG EHFLNWDNEA EMIEKIARDV SEKLNMTPSS DFDGMVGIEA HLKEMEVLLD
0201: FDYDGVKIVG IFGPAGIGKT TIARALHSLL LFKKFQLTCF VDNLRGSYPI GIDEYGLKLR LQEHLLSKIL NQDGMRISHL GAVKERLCDM KVLIILDDVN
0301: DVKQLEALAN DTTWFGPGSR VIVTTENKEI LQRHGIDNMY HVGFPSDEKA MEILCGYAFK QSSPRPGFNY LAQKVTWLCG NLPLGLRVVG SSLRGKKEDE
0401: WKSVIRRLDT IIDRDIEDVL RVGYESLHEN EQSLFLHIAV FFNCKDVDLV KAMLADDNLD IAHGLKILVN KSLIYISTTG EIRMHKLLQQ VGRQAINRQE
0501: PWKRLILTNA QEICYVLEND KGTGVVSGIS FDTSGISEVI LSNRALRRMS NLRFLSVYKT RHDGNNIMHI PEDMKFPPRL RLLHWEAYPS KSLPLGFCLE
0601: NLVELNMKDS QLEKLWEGTQ LLTNLKKMDL SRSVHLKELP DLSNATNLER LELCDCRALV ELPKSIGNLH KLENLVMANC ISLEVIPTHI NLASLEHITM
0701: TGCSRLKTFP DFSTNIERLL LIGTSVEEVP ASIRHWSSLS DFCIKNNEDL KSLTYFPEKV ELLDLSYTDI EKIPDCIKGF HGLKSLDVAG CRKLTSLPEL
0801: PMSLGLLVAL DCESLEIITY PLNTPSARLN FTNCFKLGEE SRRLIIQRCA TQFLDGYACL PGRVMPDEFN QRTSGNNSLN IRLSSASFKF KACVVISPNQ
0901: QQHSWEHTDI RCIVGSYNKV ICVEHPNEST RIQTEHLCIF HGSVSEVSSN EALFEFCIDA SNQFDNFKIL ECGVRILTNE PERSSKKTVS RGLRSHAKIL
1001: KACLHKRKQK KMIGYLLKEE FGLPRDNRII EVDEDNNNDH TVSLDSASDN VEGKEKPIDC WSWLCICFDL SNIVRNMGKL VLGKETTESI DGGVLHEYST
1101: RKDDDVTMG
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)