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AT2G04865.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 0.994
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Aminotransferase-like, plant mobile domain family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Aminotransferase-like, plant mobile domain family protein; CONTAINS InterPro DOMAIN/s: Aminotransferase-like, plant mobile domain (InterPro:IPR019557); BEST Arabidopsis thaliana protein match is: Aminotransferase-like, plant mobile domain family protein (TAIR:AT2G25010.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IVA8eggNOG:ENOG410YC97EMBL:CP002685EnsemblPlants:AT2G04865
EnsemblPlants:AT2G04865.1entrez:815033GeneID:815033GO:GO:0008483
Gramene:AT2G04865.1hmmpanther:PTHR31973InParanoid:F4IFD0InterPro:IPR019557
iPTMnet:F4IFD0KEGG:ath:AT2G04865OMA:WYMRITRPaxDb:F4IFD0
Pfam:PF10536PRIDE:F4IFD0Proteomes:UP000006548RefSeq:NP_671779.1
TAIR:AT2G04865UniGene:At.52640UniProt:F4IFD0
Coordinates (TAIR10) chr2:+:1712149..1714599
Molecular Weight (calculated) 75513.30 Da
IEP (calculated) 4.71
GRAVY (calculated) -0.54
Length 667 amino acids
Sequence (TAIR10)
(BLAST)
001: MDVLANPGPL KDIVLYDQEK HVSSAVWDGQ ERGALRCHEH TSKLGEWKLK PKQIELVERA GFGFLRRIPA ISLDNPLISA LVERWRRETN TFHFTVGEMT
101: VTLEDIALLL GLGIDGKPVI GLTYTTCSAV CERYLGKSPA SNSASGGMVK LSWLKDNFSE CPDDASFEEV ERRTRAYLLY LVGSTIFSTT TGNKVPVMYL
201: PLFEDFDDAG TFAWGAAALA FLYRALGNAS VKSQSTICGC LTLLQCWSYY HLNIGRPKLN REPIHDQFPF VLKWKGKQNG PTANRDVVFY RKALDVMKPT
301: DVVWLPYENM NGGDMSDRMR KSLLLGRSKT MLISFDKAER HLPDRCRKQF DLFQDIPADV QRWVRKSRGV DGGVDLSNKM ESELSEWEMR WENIVPDDVQ
401: GVDEADYMRW YLGITRKIVG RPISLSSEFQ RTISNVRDIL ELAENFQIHD LDLERGNMIS RIIGLAQDCL RDQVGVTATP ETQQQIELGK RMRGKERVRR
501: KGMGKRRKGI DPMEDYGGSE DESQFGPLVE VGQMHLPLSH TNSVYDGTHM YDAVTKVDDM ELCDTIPQLP ETQDIHKIEG SLLDDTDKFV EESKLQEEFD
601: GEEPTESYDV KKEDKESKVE DDDAAKGFSD VSGEENANRE EEDETEMGES VAESSSLDRR GENTVVA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)