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AT2G04550.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : indole-3-butyric acid response 5
Curator
Summary (TAIR10)
Encodes a protein phosphatase that interacts with MPK12, but not with other MAP kinases. It can dephosphorylate a dually phosphorylated MPK12 in vitro and can inactivate MPK12 in vivo. ibr5 mutants have reduced sensitivity to auxin and abscisic acid. IBR5 promotes auxin responses, including auxin-inducible transcription, differently than the TIR1 auxin receptor and without destabilizing Aux/IAA repressor proteins.
Computational
Description (TAIR10)
indole-3-butyric acid response 5 (IBR5); CONTAINS InterPro DOMAIN/s: Protein-tyrosine phosphatase, active site (InterPro:IPR016130), Dual-specific/protein-tyrosine phosphatase, conserved region (InterPro:IPR000387), Dual specificity phosphatase, catalytic domain (InterPro:IPR000340), Dual specificity phosphatase, subgroup, catalytic domain (InterPro:IPR020422); BEST Arabidopsis thaliana protein match is: dual specificity protein phosphatase 1 (TAIR:AT3G23610.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G04550-MONOMERBioCyc:ARA:GQT-2631-MONOMERBioGrid:398EC:3.1.3.48
eggNOG:COG2453eggNOG:KOG1716EMBL:AC006951EMBL:AY337455
EMBL:BT004283EMBL:BT005609EMBL:CP002685EnsemblPlants:AT2G04550
EnsemblPlants:AT2G04550.1entrez:814997Gene3D:3.90.190.10GeneID:814997
Genevisible:Q84JU4GO:GO:0000188GO:GO:0004725GO:GO:0005634
GO:GO:0008138GO:GO:0009733GO:GO:0009734GO:GO:0009737
GO:GO:0009738GO:GO:0033549GO:GO:0035556GO:GO:0043407
GO:GO:0046620GO:GO:0061388hmmpanther:PTHR10159hmmpanther:PTHR10159:SF329
HOGENOM:HOG000006127InParanoid:Q84JU4IntAct:Q84JU4InterPro:IPR000340
InterPro:IPR000387InterPro:IPR016130InterPro:IPR020422InterPro:IPR024950
InterPro:IPR029021KEGG:ath:AT2G04550KO:K04459OMA:AIKFLDQ
PANTHER:PTHR10159PaxDb:Q84JU4Pfam:PF00782Pfam:Q84JU4
Pfscan:PS50054Pfscan:PS50056PhylomeDB:Q84JU4PIR:G84458
PRIDE:Q84JU4PRO:PR:Q84JU4PROSITE:PS00383PROSITE:PS50054
PROSITE:PS50056ProteinModelPortal:Q84JU4Proteomes:UP000006548RefSeq:NP_178534.2
RefSeq:NP_973418.2scanprosite:PS00383SMART:SM00195SMR:Q84JU4
STRING:3702.AT2G04550.1SUPFAM:SSF52799TAIR:AT2G04550tair10-symbols:DSPTP1E
tair10-symbols:IBR5UniGene:At.41296UniProt:Q84JU4
Coordinates (TAIR10) chr2:+:1588538..1589838
Molecular Weight (calculated) 28692.00 Da
IEP (calculated) 6.61
GRAVY (calculated) -0.45
Length 257 amino acids
Sequence (TAIR10)
(BLAST)
001: MRKRERENPC SICGHYHKYE EGEVCGVCGH CMPVSSDTVA PQQVHVSAFP SEILPEFLYL GSYDNASRSE LLKTQGISRV LNTVPMCQNL YRNSFTYHGL
101: DNEKVLQFDD AIKFLDQCEK DKARVLVHCM SGKSRSPAVV VAYLMKRKGW RLAESHQWVK QRRPSTDISP EFYQQLQEFE QGIFGSEMMS AMNINDAPTF
201: GFGFPKIDNQ AQAPVFNNAP TSSIFSSPAS SIPPQEFTFG ATPPKPTTGG DIAMDGS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)