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AT2G03730.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:24134884 (2013): cytoskeleton microtubules
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : ACT domain repeat 5
Curator
Summary (TAIR10)
Member of a small family of ACT domain containing proteins. ACT domains are thought to be involved in amino acid binding.
Computational
Description (TAIR10)
ACT domain repeat 5 (ACR5); FUNCTIONS IN: amino acid binding; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid-binding ACT (InterPro:IPR002912); BEST Arabidopsis thaliana protein match is: ACT domain repeat 4 (TAIR:AT1G69040.2); Has 2794 Blast hits to 1588 proteins in 427 species: Archae - 0; Bacteria - 1672; Metazoa - 0; Fungi - 0; Plants - 582; Viruses - 0; Other Eukaryotes - 540 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JVZQeggNOG:ENOG41105EIEMBL:AC006836EMBL:AF528061
EMBL:AK317500EMBL:BT000908EMBL:CP002685EnsemblPlants:AT2G03730
EnsemblPlants:AT2G03730.1EnsemblPlants:AT2G03730.2entrez:814900GeneID:814900
Genevisible:Q9ZPQ8GO:GO:0008152GO:GO:0016597Gramene:AT2G03730.1
Gramene:AT2G03730.2hmmpanther:PTHR31096hmmpanther:PTHR31096:SF13HOGENOM:HOG000239159
InParanoid:Q9ZPQ8InterPro:IPR002912iPTMnet:Q9ZPQ8KEGG:ath:AT2G03730
OMA:AKFIRRVPaxDb:Q9ZPQ8Pfam:PF01842Pfam:Q9ZPQ8
Pfscan:PS51671PhylomeDB:Q9ZPQ8PIR:F84451PRIDE:Q9ZPQ8
PRO:PR:Q9ZPQ8PROSITE:PS51671ProteinModelPortal:Q9ZPQ8Proteomes:UP000006548
RefSeq:NP_001030965.1RefSeq:NP_565304.1SMR:Q9ZPQ8STRING:3702.AT2G03730.1
SUPFAM:SSF55021TAIR:AT2G03730tair10-symbols:ACR5UniGene:At.25112
UniProt:Q9ZPQ8
Coordinates (TAIR10) chr2:-:1137820..1139809
Molecular Weight (calculated) 51146.80 Da
IEP (calculated) 5.40
GRAVY (calculated) -0.31
Length 456 amino acids
Sequence (TAIR10)
(BLAST)
001: MDVCLSYSYN MDDEIAKFIR RVNPPRVVID NEVCKDVTVI KVDSANKHGI LLEVVQVLTE LNLTIKKAYI SSDGGWFMDV FNVTDQDGNK VTDEIVLEYI
101: RKSLGPDESS CFSPSMRSTI GVKQSVDYTV VELTGTDRPG LLSELCAVLM DLQCNVVNAE IWTHRAKAAA VLQVTDEETC SAITDPERLS KIRKLLGYVL
201: TGGSSGRRFR EPKTTVSSAL NETHTDRKLH QLMFADRDYD EWENNVDDED KCGRVIPDVD VSNLHDLDYS IVMIKCKDRP KLLFDTVFTL TDMNYVVSHA
301: SIDAEGPQAY QEYYIRHTDG SPVKSEAERQ RVIKCLKAAI QRRVSEGLKL ELCTSDRVGL LSDVTRIFRE NSLTVTRAEV KTKGDKALNT FYVRDASGYQ
401: VDTKTIESIR QVIGQTILQV KGGNTDAKPS PQDSPTGFLF GVFKSRSFVN FGLIRS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)