suba logo
AT1G79570.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
nucleus 0.979
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain; FUNCTIONS IN: protein serine/threonine/tyrosine kinase activity, protein kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cytosol; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270), Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain (TAIR:AT1G16270.2); Has 118967 Blast hits to 117429 proteins in 4809 species: Archae - 112; Bacteria - 12197; Metazoa - 45923; Fungi - 10276; Plants - 32353; Viruses - 463; Other Eukaryotes - 17643 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G79570-MONOMEReggNOG:COG0515eggNOG:KOG0192EMBL:AC007202
EMBL:CP002684EnsemblPlants:AT1G79570EnsemblPlants:AT1G79570.1entrez:844295
GeneID:844295GO:GO:0004712GO:GO:0005524GO:GO:0005829
Gramene:AT1G79570.1hmmpanther:PTHR23257hmmpanther:PTHR23257:SF537HOGENOM:HOG000084333
InterPro:IPR000270InterPro:IPR000719InterPro:IPR001245InterPro:IPR011009
InterPro:IPR017441KEGG:ath:AT1G79570ncoils:CoilOMA:KTETRHA
Pfam:PF00564Pfam:PF07714Pfscan:PS50011PhylomeDB:Q9SAJ2
PIR:B96827PRINTS:PR00109PROSITE:PS00107PROSITE:PS50011
Proteomes:UP000006548Reactome:R-ATH-442742Reactome:R-ATH-5674499RefSeq:NP_178075.1
scanprosite:PS00107SMART:SM00220SMART:SM00666SMR:Q9SAJ2
STRING:3702.AT1G79570.1SUPFAM:SSF54277SUPFAM:SSF56112TAIR:AT1G79570
UniGene:At.48395UniGene:At.66914UniProt:Q9SAJ2
Coordinates (TAIR10) chr1:-:29932856..29937540
Molecular Weight (calculated) 137250.00 Da
IEP (calculated) 5.04
GRAVY (calculated) -0.62
Length 1248 amino acids
Sequence (TAIR10)
(BLAST)
0001: MDKARHQQLF QHSMEPGYRN ETVPQPFMPD QTGSASANMR PPNSNGSDVK AVHNFSIQTG EEFSLEFMRD RVIPQRSSNP NGAGDMNYNT GYMELRGLIG
0101: ISHTGSECAS DVSRFSTVEN GTSDIERTNS SLHEFGNKLN HVQSAPQALL SKDSSVGNLH GYKNTSSSAS GSVTAKVKIL CSFGGKILPR PGDSKLRYVG
0201: GETHIISIRK DISWQELRQK ILEIYYQTRV VKYQLPGEDL DALVSVSSEE DLQNMLEEYN EMENRGGSQK LRMFLFSISD MDDALLGVNK NDGDSEFQYV
0301: VAVNGMDIGS GKNSTLLGLD SSSANNLAEL DVRNTEGINT IAGDVVGVGA SQLMVNGFQQ TSAQQSESIP PSSSLHYSQS IPLNAAYQLQ QSVPPSSALH
0401: YPQSITPGSS LQYPQSITPG SSYQYPQSII PGSASSYGIY PQYYGHVVQH GERERFPLYP DHSSNYSAIG ETTSSIPIQG HVSQQGGWAE GYPYPGSTPK
0501: STQALAEEQK VSSDMKIREE VEPENRKTPG NDHQNPPQID DVEVRNHNQV REMAVATTPP SQDAHLLPPS RDPRQNTTAK PATYRDAVIT GQVPLSGIED
0601: QLSTSSSTYA PVHSDSESNL IDLNYPEPEQ SSQRVYCSER IPREQLELLN RLSKSDNSLS SQFVTSESPA NTAQQDSGKE AVGKSHDEFK TVNDDANHHT
0701: HKDVETIFEK VGVSDETLES EPLHKIVNPD DANKNRVVNG ADTEIGVSNL SHVNAAMSHV IPEEQASLQG DILIDINDRF PRDFLSEIFS QAISEDTSTV
0801: RPYPHDGAAV SMNVQNHDRK NWSYFQQLAE DQFIQRDVVL DQADSRIPSD RKDGGESSRL PYVSPLSRDG ISTNLANPQL TLGQDYGGNF SEKDGGGTGS
0901: IPPALENEQM KVTESEEFGA MVENLRTPDS EPKDEKTETR HAALPPLGSE FDYSGLQIIK NEDLEELREL GSGTFGTVYH GKWRGSDVAI KRIKKSCFAG
1001: RSSEQERLTG EFWGEAEILS KLHHPNVVAF YGVVKDGPGG TLATVTEYMV DGSLRHVLVR KDRHLDRRKR LIIAMDAAFG MEYLHSKNTV HFDLKCDNLL
1101: VNLKDPSRPI CKVGDFGLSK IKRNTLVSGG VRGTLPWMAP ELLNGSSSKV SEKVDVFSFG IVLWEILTGE EPYANMHYGA IIGGIVNNTL RPTIPGFCDD
1201: EWRTLMEECW APNPMARPSF TEIAGRLRVM SSAATSTQSK PSAHRASK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)