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AT1G77510.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
endoplasmic reticulum 1.000
What is SUBAcon?
Predictors External Curations
AmiGO : endoplasmic reticulum 16618929
SwissProt : endoplasmic reticulum 16381842
TAIR : plastid 15028209
TAIR : plasma membrane 17151019
TAIR : endoplasmic reticulum 16618929
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:24970193 (2013): endoplasmic reticulum
  • PMID:31615849 (2019): plastid plastid thylakoid
  • PMID:31520498 (2020): mitochondrion
  • PMID:30962257 (2019): plastid
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:30447334 (2019): plasma membrane
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:27943495 (2017): mitochondrion
  • PMID:27122571 (2016): mitochondrion
  • PMID:26781341 (2016): plasma membrane
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:25641898 (2015): plasma membrane
  • PMID:24393051 (2015): endoplasmic reticulum
  • PMID:23673981 (2013): plastid plastid stroma plastoglobules
  • PMID:22923678 (2012): endoplasmic reticulum
  • PMID:22550958 (2012): plastid
  • PMID:22430844 (2012): Golgi
  • PMID:22215637 (2012): plasma membrane
  • PMID:21433285 (2011): plasma membrane
  • PMID:18998720 (2009): extracellular region
  • PMID:18431481 (2008): plastid
  • PMID:17644812 (2007): plasma membrane
  • PMID:17151019 (2007): plant-type vacuole
  • PMID:16618929 (2006): endoplasmic reticulum
  • PMID:15028209 (2004): plastid
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : PDI-like 1-2
Curator
Summary (TAIR10)
Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Transcript levels for this gene are up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). AtIRE1-2 does not appear to be required for this response, but the atbzip60 mutant has a diminished response.
Computational
Description (TAIR10)
PDI-like 1-2 (PDIL1-2); FUNCTIONS IN: protein disulfide isomerase activity; INVOLVED IN: response to cadmium ion, response to salt stress, response to endoplasmic reticulum stress; LOCATED IN: endoplasmic reticulum, plasma membrane, chloroplast; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Disulphide isomerase (InterPro:IPR005788), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Thioredoxin-like subdomain (InterPro:IPR006662), Protein disulphide isomerase (InterPro:IPR005792), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: PDI-like 1-1 (TAIR:AT1G21750.1); Has 30299 Blast hits to 17128 proteins in 2902 species: Archae - 354; Bacteria - 14610; Metazoa - 5224; Fungi - 1567; Plants - 2445; Viruses - 29; Other Eukaryotes - 6070 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G77510-MONOMEREC:5.3.4.1eggNOG:COG0526eggNOG:KOG0190
EMBL:AC010704EMBL:AK226862EMBL:CP002684EnsemblPlants:AT1G77510
EnsemblPlants:AT1G77510.1entrez:844087Gene3D:3.40.30.10GeneID:844087
Genevisible:Q9SRG3GO:GO:0003756GO:GO:0005774GO:GO:0005783
GO:GO:0005788GO:GO:0005794GO:GO:0005886GO:GO:0006457
GO:GO:0009507GO:GO:0009570GO:GO:0009644GO:GO:0009651
GO:GO:0010205GO:GO:0034976GO:GO:0045454GO:GO:0046686
Gramene:AT1G77510.1hmmpanther:PTHR18929hmmpanther:PTHR18929:SF108HOGENOM:HOG000162459
InParanoid:Q9SRG3InterPro:IPR005788InterPro:IPR005792InterPro:IPR012336
InterPro:IPR013766InterPro:IPR017937iPTMnet:Q9SRG3KEGG:ath:AT1G77510
KO:K09580OMA:DNVHDFVPaxDb:Q9SRG3Pfam:PF00085
Pfam:PF13848Pfam:Q9SRG3Pfscan:PS51352PhylomeDB:Q9SRG3
PIR:E96804PRIDE:Q9SRG3PRO:PR:Q9SRG3PROSITE:PS00014
PROSITE:PS00194PROSITE:PS51352ProteinModelPortal:Q9SRG3Proteomes:UP000006548
RefSeq:NP_177875.1scanprosite:PS00194SMR:Q9SRG3STRING:3702.AT1G77510.1
SUPFAM:SSF52833TAIR:AT1G77510tair10-symbols:ATPDI6tair10-symbols:ATPDIL1-2
tair10-symbols:PDI6tair10-symbols:PDIL1-2TIGRfam:TIGR01126TIGRfam:TIGR01130
TIGRFAMs:TIGR01126TIGRFAMs:TIGR01130UniGene:At.17801UniProt:Q9SRG3
Coordinates (TAIR10) chr1:+:29126742..29129433
Molecular Weight (calculated) 56367.20 Da
IEP (calculated) 4.64
GRAVY (calculated) -0.32
Length 508 amino acids
Sequence (TAIR10)
(BLAST)
001: MAFKGFACFS ILLLLSLFVS SIRSEETKEF VLTLDHSNFT ETISKHDFIV VEFYAPWCGH CQKLAPEYEK AASELSSHNP PLALAKIDAS EEANKEFANE
101: YKIQGFPTLK ILRNGGKSVQ DYNGPREAEG IVTYLKKQSG PASVEIKSAD SATEVVGEKN VVAVGVFPKL SGDEFDSFMA LAEKLRADYD FAHTLDAKFL
201: PRGESVEGPA VRLFKPFDEL FVDSKDFNGE ALEKFVKESS IPLVTVFDSD PNNHPYVAKF FESPATKAMM FVNFTGATAE ALKSKYREVA TSNKDQSLAF
301: LVGDAESSQG AFQYFGLEES QVPLIIIQTP DNKKYLKVNV EVDQIESWFK DFQDGKVAVH KKSQPIPAEN NEPVKVVVAE SLDDIVFKSG KNVLIEFYAP
401: WCGHCQKLAP ILDEVALSFQ NDPSVIIAKL DATANDIPSD TFDVKGFPTI YFRSASGNVV VYEGDRTKED FINFVEKNSE KKPTSHGEES TKSEEPKKTE
501: ETAAKDEL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)