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AT1G76720.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 1.000
ASURE: cytosol
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : eukaryotic translation initiation factor 2 (eIF-2) family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
eukaryotic translation initiation factor 2 (eIF-2) family protein; FUNCTIONS IN: GTP binding, GTPase activity, translation initiation factor activity; INVOLVED IN: translational initiation; LOCATED IN: cellular_component unknown; EXPRESSED IN: guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation initiation factor 2 related (InterPro:IPR015760), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 2 (eIF-2) family protein (TAIR:AT1G76820.1); Has 176116 Blast hits to 120626 proteins in 4229 species: Archae - 1560; Bacteria - 50188; Metazoa - 57384; Fungi - 15710; Plants - 7705; Viruses - 672; Other Eukaryotes - 42897 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0532eggNOG:KOG1144EMBL:CP002684EnsemblPlants:AT1G76720
EnsemblPlants:AT1G76720.1entrez:844006Gene3D:3.40.50.10050Gene3D:3.40.50.300
GeneID:844006GO:GO:0003743GO:GO:0003924GO:GO:0005525
Gramene:AT1G76720.1hmmpanther:PTHR23115hmmpanther:PTHR23115:SF186InParanoid:F4I410
InterPro:IPR000795InterPro:IPR004161InterPro:IPR005225InterPro:IPR009000
InterPro:IPR023115InterPro:IPR027417iPTMnet:F4I410KEGG:ath:AT1G76720
KO:K03243ncoils:CoilOMA:NESNGDKPaxDb:F4I410
Pfam:PF00009Pfam:PF03144Pfam:PF11987Pfscan:PS51722
PRIDE:F4I410PRINTS:PR00315PROSITE:PS51722ProteinModelPortal:F4I410
Proteomes:UP000006548Reactome:R-ATH-72706RefSeq:NP_177798.3SMR:F4I410
STRING:3702.AT1G76720.1SUPFAM:0037976SUPFAM:SSF50447SUPFAM:SSF52156
SUPFAM:SSF52540TAIR:AT1G76720TIGRfam:TIGR00231TIGRFAMs:TIGR00231
UniGene:At.70343UniProt:F4I410
Coordinates (TAIR10) chr1:-:28794144..28798780
Molecular Weight (calculated) 131369.00 Da
IEP (calculated) 5.19
GRAVY (calculated) -0.75
Length 1191 amino acids
Sequence (TAIR10)
(BLAST)
0001: MGRKKPSSSR GGDDEQPPAA SSLVGAESKK KAVQSDEEDK YSINTEEEKV VITGKKKSNK KVTQKHDDDD DFTEAVPENG FVGKKKKSKG KNRGGSVSFA
0101: LLSGKEETDD NESNGDKDDE PVISFTGKKN ASNKGKKGFA VSAFDALGGD KDDEEVDGDE EQVSPITFSE GTMGDEESLE ITFSGKKKGS IVLASLGDDS
0201: VADETSQAKT PDTKSVEVIE TGKIKKKKKN KNKVARTLEE EDDLDKLLAE LGETPAAERP ASSTPEVEKV QAQPGPVAPV ENAGEKEGEK ETVETAAAKK
0301: KKKKKEKDKE KKAAAAATSS VEAKEEKQEE SVTEPLQPKK KDAKGKAAEK KIPKHVREMQ EALARRQEAE ERKKKEEEEK LRKEEEERRR QEELEAQAEE
0401: AKRKRKEKEK EKLLRKKLEG KLLTAKQKTE AQKREAFKNQ LLAAGRGLPV ADDVGDATSS KRPIYANKKK PSRQKGNDTS VQVEDEVEPQ ENHAATLGEV
0501: GSEDTEKVDL LESANTGEKS GPADVAQENG VEEDDEWDAK SWDNVDLKID DKEEEAQPVV KKELKAHDSD HETEKPTAKP AGMSKLTTGA VKAISEVEDA
0601: ATQTKRAKKG KCLAPSEFIK EGGENLRSII CCIMGHVDSG KTKLLDCIRG TNVQEGEAGG ITQQIGATYF PAKNIRERTR ELKADAKLKV PGLLVIDTPG
0701: HESFTNLRSR GSSLCDLAIL VVDIKHGLEP QTIESLNLLR MRNTEFIIAL NKVDRLYGWK TCKNAPIVKA MKQQNKDVTN EFNIRLTDII TQFKEQGLNT
0801: EIYYKNKEMG ETFSIVPTSA KSGEGVPDLL LWLVQWAQKT MVEKLTYVDE VQCTVLEVKV IEGHGTTIDV VLVNGELHEG DQIVVCGLQG PIVTTIRALL
0901: TPHPMKELRV KGTYLHHKEI KAAQGIKITA QGLEHAIAGT SLHVVGPDDD IEAMKESAME DMESVLSRID KSGEGVYVQT STLGSLEALL EFLKTPAVNI
1001: PVSEGYNEGW SDAREEKEYA TILAFDVKVT TEARELADEM GVKIFCADII YQLFNQFQVY IENIKEEKKK ESAGEAVFPC VLQILPNCVF NKRDPIILGV
1101: KVHDGILKIG TPICVPGREF TDIGRIASIE NNHKPVDYAE KGDEVAIKIV ASNREEQKMF GRHFDMEDEL VSHISRRSID ILKADYMVSQ G
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)