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AT1G71010.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.915
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : FORMS APLOID AND BINUCLEATE CELLS 1C
Curator
Summary (TAIR10)
Encodes a protein that is predicted to act as a phosphatidylinositol-3P 5-kinase, but, because it lacks a FYVE domain, it is unlikely to be efficiently targeted to membranes containing the proposed phosphatidylinositol-3P substrate. Therefore, its molecular function remains unknown.
Computational
Description (TAIR10)
FORMS APLOID AND BINUCLEATE CELLS 1C (FAB1C); FUNCTIONS IN: 1-phosphatidylinositol-4-phosphate 5-kinase activity, phosphatidylinositol phosphate kinase activity, ATP binding; INVOLVED IN: phosphatidylinositol metabolic process, cellular protein metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Phosphatidylinositol-4-phosphate 5-kinase, core (InterPro:IPR002498); BEST Arabidopsis thaliana protein match is: phosphatidylinositol-4-phosphate 5-kinase family protein (TAIR:AT3G14270.1); Has 4961 Blast hits to 4644 proteins in 430 species: Archae - 584; Bacteria - 4; Metazoa - 1658; Fungi - 1043; Plants - 685; Viruses - 0; Other Eukaryotes - 987 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G71010-MONOMEREC:2.7.1.150eggNOG:COG0459eggNOG:COG5253
eggNOG:KOG0230EMBL:AC008148EMBL:AY065168EMBL:BT010349
EMBL:CP002684EnsemblPlants:AT1G71010EnsemblPlants:AT1G71010.1entrez:843440
Gene3D:3.30.800.10Gene3D:3.30.810.10Gene3D:3.50.7.10GeneID:843440
Genevisible:Q9SSJ8GO:GO:0000285GO:GO:0005524GO:GO:0046854
GO:GO:0090332Gramene:AT1G71010.1hmmpanther:PTHR11353hmmpanther:PTHR11353:SF101
HOGENOM:HOG000241144InParanoid:Q9SSJ8InterPro:IPR002423InterPro:IPR002498
InterPro:IPR027409InterPro:IPR027483InterPro:IPR027484iPTMnet:Q9SSJ8
KEGG:ath:AT1G71010KO:K00921OMA:HCSNDLMPaxDb:Q9SSJ8
Pfam:PF00118Pfam:PF01504Pfam:Q9SSJ8Pfscan:PS51455
PhylomeDB:Q9SSJ8PRIDE:Q9SSJ8PRO:PR:Q9SSJ8PROSITE:PS51455
ProteinModelPortal:Q9SSJ8Proteomes:UP000006548Reactome:R-ATH-1660514Reactome:R-ATH-1660516
Reactome:R-ATH-1660517RefSeq:NP_177257.3SMART:SM00330SMR:Q9SSJ8
STRING:3702.AT1G71010.1SUPFAM:SSF52029SUPFAM:SSF56104TAIR:AT1G71010
tair10-symbols:FAB1CUniGene:At.22900UniGene:At.68664UniProt:Q9SSJ8
Coordinates (TAIR10) chr1:+:26782839..26788712
Molecular Weight (calculated) 185504.00 Da
IEP (calculated) 5.22
GRAVY (calculated) -0.52
Length 1648 amino acids
Sequence (TAIR10)
(BLAST)
0001: MGIPDGSLLD LIDKVRSWIT SDSSDSLFLL SSSKQDFGIM PIVSKMCHDC GTKVEQGYCC LSCGSCWCKS CSDTEESKMK LCRECDAEVR ELRVKSYDKV
0101: HPRDSPDPPS SLATESESLA SSLEIRDCRN MASIRCYPSR GEEEEARYCG KQLLSPSSDN YQDSSDIESG SVSARHELFS CKSSAGSSPH DSPLRNNFSP
0201: LGRFVQHAKD LRSPTVCSFD NHQEQLLADN LVKPGQGVLE QEDHEEEEDK LQQPLDFENN GRIWYPPPPE DENDDAESNY FHYDDEDDDI GDSATEFSLS
0301: SSFSSHIPTK EKLGENSNEP LRTVVHDHFR ALVAELLRGE ELSPSDDGSA GEWLDIVTAL AWQAANFVKP DTRAGGSMDP GNYVKIKCVA SGNQNESILI
0401: RGIVCSKNIT HKRMISQYKN PRVMLLAGSL EYQRVAGQLA SFNTLLQQEN EHMKAIIAKI ESLRPNVLLV EKSASSYAQQ YLLEKEISLV LNVKRSLLDR
0501: IARCTGAVLC PSLDSISTAR LGHCELFRTE RVLEQHEAGN QSNRKPSRTL MYFEGCPRRL GCTVVLRGSC REELKKVKHV IQYAVFAAYH LSLETSFLAD
0601: EGASLPKIRL KQPGMVRTAS QRRIIDEGIS LITQSPTETD SQALLETAAH EDEHTAPMPE HEVCESLCED FDPTQIFPPS SEVETEQSDT LNGDFANNLV
0701: TRSYSSNQLN DLHEPTLCLS SEIPETPTQQ PSGEEDNGRG EEENQLVNPQ DLPQHESFYE DDVSSEYFSA ADSHQSILVS FSSRCVLKES VCERSRLLRI
0801: KFYGSFDKPL GRYLKDDLFD KTSSCRSCKE LVDAHVLCYS HQNGNLTINV RRLPSMKLPG EQDGKIWMWH RCLRCAHVDG VPPATRRVVM SDAAWGLSFG
0901: KFLELSFSNH ATANRVASCG HSLQRDCLRF YGFGNMVAFF RYSPINILTV LLPPSMLEFN SHPQQEWIRT EAAELVGKMR TMYTEISDML NRMEEKSSLL
1001: EPEQSEACDL HSRIIGLIDQ LVKEKDEYDD ALQPIFEENL QIQGSLDILE LNRLRRALMI GAHAWDHQLY LLNSQLKKAS VFKTGDDNAP RNPEMHDPPK
1101: IDRRMQEGSD ERDEQSHTDS EANGDNKDPE NIPSPGTSLS ERIDSAWLGS FQNLEKAETI AETEGFSAVN SSLRRLARPI RVQSFDSAIR FQERIQKGLP
1201: PSSLYLSTLR SFHASGEYRN MVRDPVSNVM RTYSQMLPLE VQKLDLIVGS APTYISSASQ MADGARMLIP QRGLNDIVVP VYDDDPASVV SYAINSKEYK
1301: EWIVNKGLAS SSSSSNLNNR ESEPSAFSTW RSLSMDVDYI QHAVYGSSQD DRKSPHLTIS FSDRASSSST ATEGKVKFSV TCYFATQFDT LRKTCCPSEV
1401: DFVRSLSRCQ RWSAQGGKSN VYFAKSLDER FIIKQVVKTE LDSFEDFAPE YFKYLKESLS SGSPTCLAKI LGIYQVSIKH PKGGKETKMD LMVMENLFYN
1501: RRISRIYDLK GSARSRYNPN TSGADKVLLD MNLLETLRTE PIFLGSKAKR SLERAIWNDT NFLASVDVMD YSLLVGFDEE RKELVLGIID FMRQYTWDKH
1601: LETWVKASGI LGGPKNASPT IVSPKQYKRR FRKAMTTYFL TVPEPWTS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)