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AT1G69380.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein of unknown function (DUF155)
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein of unknown function (DUF155); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF155 (InterPro:IPR003734); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF155) (TAIR:AT5G13610.1); Has 567 Blast hits to 567 proteins in 242 species: Archae - 0; Bacteria - 202; Metazoa - 8; Fungi - 221; Plants - 79; Viruses - 0; Other Eukaryotes - 57 (source: NCBI BLink).
Protein Annotations
eggNOG:COG1723eggNOG:KOG2861EMBL:AC018364EMBL:AC073178
EMBL:CP002684EnsemblPlants:AT1G69380EnsemblPlants:AT1G69380.1entrez:843270
GeneID:843270GO:GO:0005739GO:GO:0010082GO:GO:0032875
GO:GO:0051302Gramene:AT1G69380.1hmmpanther:PTHR16255hmmpanther:PTHR16255:SF9
InterPro:IPR003734KEGG:ath:AT1G69380OMA:AGINREMPfam:PF02582
PhylomeDB:Q9C565PRO:PR:Q9C565Proteomes:UP000006548RefSeq:NP_564963.1
STRING:3702.AT1G69380.1TAIR:AT1G69380UniGene:At.24346UniGene:At.70352
UniProt:Q9C565
Coordinates (TAIR10) chr1:-:26081729..26083431
Molecular Weight (calculated) 42346.60 Da
IEP (calculated) 5.78
GRAVY (calculated) -0.17
Length 373 amino acids
Sequence (TAIR10)
(BLAST)
001: MGKWRAVAAL LLRNQLLNSS KRLNLSSSPC VSKHPTIGLA SRFLNFRHFS AFPSPISIYN NDSDSGSNDA YQNYEFGTEA EEALGKIPIK AYFLSTSIDL
101: KAMQAENLCN VVPPTSRSTN YIALKFSDFT PSGIYSLDER ESVSNCKFMV VFQYGSAILF NVDDNDVDRY LDIVRRHASG LLTEMRKDDY AVKEKPLLIE
201: EMKGGPDYIV LKTLDTNSIR IIGSVLGQSI ALDYSVSQVN KLVEEFADIN RSMAKTGTFT MTRKKLFQLV GKANSNIADV ILKVGLFERS EIAWREARYA
301: QIYEYLREEY EISQRFGDLD YKLKFIEHNI HFLQEVMQNR QSDLLEWCII FLLAIENAIG IYEIVRESAG ASL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)