AT1G75980.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.637 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Single hybrid motif superfamily protein | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Single hybrid motif superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: glycine catabolic process; LOCATED IN: mitochondrion, glycine cleavage complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Single hybrid motif (InterPro:IPR011053), Glycine cleavage H-protein (InterPro:IPR002930); Has 205 Blast hits to 205 proteins in 102 species: Archae - 6; Bacteria - 8; Metazoa - 118; Fungi - 2; Plants - 34; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:28522936..28524302 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 25429.20 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 4.78 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.54 | ||||||||||||||||||||||||||||
| Length | 225 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEILKLDVAK FPEIEDTIEL TNPKRNDEVE DCDDQQKQQL ATQEDEEEDE LRKLLLSDIG ELPISPPSAT QVNFVSYFIT DFTKSGHDQY IYRHANGLCV 101: IGLAPTHIAF KDEGGITSVD FNVGKSDRSV LKVSGKRKKN ALRSESNTAL CKVSTAKDTY IVRCCVKGSL LEVNERLIKQ PELLNSTADR EGYIAIIMPR 201: PADWTKNKES LITLEEYKEK KEMSL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)