AT3G18160.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 0.963 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : peroxin 3-1 | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
peroxin 3-1 (PEX3-1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: peroxisome organization; LOCATED IN: mitochondrion, peroxisome, integral to peroxisomal membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peroxin-3 (InterPro:IPR006966); BEST Arabidopsis thaliana protein match is: peroxin 3 (TAIR:AT1G48635.1); Has 315 Blast hits to 315 proteins in 149 species: Archae - 0; Bacteria - 0; Metazoa - 125; Fungi - 128; Plants - 49; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:6220918..6222923 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 40682.70 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.44 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.09 | ||||||||||||||||||||||||||||||||||||
| Length | 358 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MDLVRGLWRK HRRKILVTTT CLGSGYLLYK LYNAHTRKLA DLERELANER ENDEIIKTQM KAHFDNIQMI ADTTTLPHAI HHLSSRVVEE IDVSSIMDKL 101: SKGKGILIPS EKLQLWNELK ILSFTRMVLS LWSVTMLSLY IRVQVNILGR HLYIDTARGL GSSHLLDELD LIERDDEQKF LTSADFLATS GMPSLISNMQ 201: NAVKEVLKGK QLKDVLTTSA LRETVMRILD VFMSTGSPHH WVDYLMMSQD ATTDVSSSDA TVTKFHLLIT ETREVLTSND FSNVAEISLK CCAVALVEEM 301: ETQTGLATGM QLAKLLPQIE KTMPEISAEP EKNRFLQLIR DLPEVKLFFT LLYANMPQ |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)