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AT1G55910.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.998
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:30447334 (2019): plasma membrane
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:19334764 (2009): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : zinc transporter 11 precursor
Curator
Summary (TAIR10)
member of Putative zinc transporter ZIP2 - like family
Computational
Description (TAIR10)
zinc transporter 11 precursor (ZIP11); FUNCTIONS IN: cation transmembrane transporter activity, metal ion transmembrane transporter activity; INVOLVED IN: cation transport, metal ion transport, transmembrane transport; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc/iron permease (InterPro:IPR003689); BEST Arabidopsis thaliana protein match is: ZRT/IRT-like protein 2 (TAIR:AT5G59520.1); Has 1903 Blast hits to 1874 proteins in 427 species: Archae - 10; Bacteria - 369; Metazoa - 451; Fungi - 381; Plants - 446; Viruses - 0; Other Eukaryotes - 246 (source: NCBI BLink).
Protein Annotations
BioGrid:27266eggNOG:ENOG4111GP2eggNOG:KOG1558EMBL:AC002304
EMBL:AF367763EMBL:AF367764EMBL:AF410328EMBL:AY093733
EMBL:CP002684EnsemblPlants:AT1G55910EnsemblPlants:AT1G55910.1entrez:842041
GeneID:842041Genevisible:Q94EG9GO:GO:0005385GO:GO:0005886
GO:GO:0016020GO:GO:0016021GO:GO:0071577Gramene:AT1G55910.1
hmmpanther:PTHR11040hmmpanther:PTHR11040:SF23HOGENOM:HOG000238693InParanoid:Q94EG9
IntAct:Q94EG9InterPro:IPR003689KEGG:ath:AT1G55910KO:K14709
OMA:NCVERIGPaxDb:Q94EG9Pfam:PF02535Pfam:Q94EG9
PhylomeDB:Q94EG9PIR:C96600PRIDE:Q94EG9PRO:PR:Q94EG9
ProteinModelPortal:Q94EG9Proteomes:UP000006548Reactome:R-ATH-442380RefSeq:NP_564703.1
STRING:3702.AT1G55910.1TAIR:AT1G55910tair10-symbols:ZIP11TMHMM:TMhelix
UniGene:At.15095UniGene:At.67269UniProt:Q94EG9
Coordinates (TAIR10) chr1:+:20906161..20907225
Molecular Weight (calculated) 35463.40 Da
IEP (calculated) 6.02
GRAVY (calculated) 0.64
Length 326 amino acids
Sequence (TAIR10)
(BLAST)
001: MSRSLVFFFL FLVLVVPCLS HGTGGDHDDD EASHVKSSDL KSKSLISVKI ACLVIIFVLT FISGVSPYFL KWSQGFLVLG TQFAGGVFLA TALMHFLSDA
101: DETFRGLLTA EGESEPSPAY PFAYMLACAG FMLTMLADSV IAHIYSKTQN DLELQGEDKS NQRSATTETS IGDSILLIVA LCFHSVFEGI AIGISETKSD
201: AWRALWTITL HKIFAAIAMG IALLRMIPDR PLFSSITYSF AFAISSPIGV AIGIVIDATT QGSIADWIFA LSMSLACGVF VYVSVNHLLA KGYRPNKKVH
301: VDEPRYKFLA VLFGVVVIAI VMIWDT
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)