AT1G48990.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.517 What is SUBAcon? |
|
||||||||||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||||||
| Description (TAIR10) | protein_coding : Oleosin family protein | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
|||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
Oleosin family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: lipid storage; LOCATED IN: monolayer-surrounded lipid storage body, integral to membrane, membrane; CONTAINS InterPro DOMAIN/s: Oleosin (InterPro:IPR000136); BEST Arabidopsis thaliana protein match is: Oleosin family protein (TAIR:AT3G18570.1); Has 346 Blast hits to 346 proteins in 48 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 346; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||||||||||
| Coordinates (TAIR10) | chr1:+:18121470..18121979 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 18444.40 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 10.21 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.31 | ||||||||||||||||||||||||||||
| Length | 169 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MADRTNPSSH TQQRPIYNST TVPRSNTTTN HPLSSLLRQL LQSQSPNHSG QLFGFLAFFI SGGILLLLTG ITVTAFVLGF IAFLPLIIIS SPIWIPLFLI 101: VTGFLSLAGL ILATGAVVSW LYRYFKGMHP LRSDQVDYAR SRIHDTAAHV KDYAGGYFHG TLKDAAPGA |
||||||||||||||||||||||||||||
| See Also |
|
||||||||||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)