AT1G24265.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 0.581 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein of unknown function (DUF1664) | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein of unknown function (DUF1664); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1664 (InterPro:IPR012458); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1664) (TAIR:AT1G24267.1); Has 187 Blast hits to 185 proteins in 27 species: Archae - 0; Bacteria - 4; Metazoa - 29; Fungi - 2; Plants - 147; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:8600613..8603630 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 37190.20 Da | ||||||||||||||||||||||||
| IEP (calculated) | 9.11 | ||||||||||||||||||||||||
| GRAVY (calculated) | -0.25 | ||||||||||||||||||||||||
| Length | 348 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MALPLGKLTI LIGAGLIGSA FSKEGGLPDV SNLVSGAFKM VFRQLKQDEP SKSASKPHDD VLVAQVNSLR HEIQLLGSNR PITIVSPSGS GGRNYGLIII 101: VGVIGYGYVW WKGWKLPDFM FATRRSLSDA CNNVGNQIDG FYSSLKGTKR ELSSEIDMMG RRLDANTEVI QETIQEVAKL QDGTSFIKDD VKAVFDAFEN 201: LASKVCRIEG NQDITLRGVG ALHAQCQENQ RIQESNKALP STSSLPALEA APMAPSSKTL SLPPASPDES QSPSTPNVAQ KSRGLLQHTQ SMSGLKDINE 301: SSSSHNTSSN GIYFGGNGAS GSSSGVLGRF SIARIMRTRT VVNTVSTN |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)