AT3G47630.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial matrix Mmp37 (InterPro:IPR015222); Has 325 Blast hits to 325 proteins in 172 species: Archae - 0; Bacteria - 0; Metazoa - 109; Fungi - 140; Plants - 43; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:17563254..17565031 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 36040.90 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 9.62 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.13 | ||||||||||||||||||||||||||||
| Length | 320 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MKTLCDDLSC LLIDCKNVTF AFVQSKMVDY ILGVSDPIKW HSANLKMNSD HYASWMVHLG GARLITNVAD KVGVGVHFNP FVNWNDRKLK YGVVRMHDLV 101: QDILDWKRFY LSGRLQKPVH MLVDNLDIED VNSVNKRAAI SAALLLLPSK FTEEDLYAKI CSLSYMGDLR MFFAEDTNKV NKIVKGQFDL FQSMYKPFLE 201: ECETKNLLRF SSAEASHTKL VQDSSLSATR SLVSSLPASV RSQMGKSLGE KKFVSETGRV MGEVCISSRE EAAKCMEKVM RRRVMVSSGR QAVSGFLAAG 301: AINATMYLSQ KMRKAWNSRA |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)