AT3G11620.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:golgi 0.361 plasma membrane 0.328 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : alpha/beta-Hydrolases superfamily protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2305 (InterPro:IPR019363); Has 334 Blast hits to 332 proteins in 157 species: Archae - 0; Bacteria - 7; Metazoa - 123; Fungi - 108; Plants - 47; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:3669551..3671734 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 35097.30 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.66 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.04 | ||||||||||||||||||||||||||||||||
| Length | 312 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: METQNKLMNE TKRHVKSRLC RVSGSMTEMM EIQAENPTFH VLFIPGNPGV VSFYKDFLES LYEFLGGNAS VIAIGQISHT SKDWESGRLF SFQEQIDHKI 101: DFIRQELESV KVPIILVGHS IGSYISLELL KKFSDKVVYC IGLYPFLTLN QQSTKQSLIG KLAASSVLSA TASFLIASLR LLPMSAARLL VSKSIGASWS 201: DTAVQATCTH LRQYHTMRNV LFMAKSEFRE LAAEPDWDFM RENQSKLAFL FGIDDHWGPL QLFEEISKQA PHTSLSIERE GHTHGFCCTV AGSAWVAQHV 301: ATLIKNRFSQ LQ |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)