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AT3G07440.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G48530.1); Has 37 Blast hits to 37 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IKBMeggNOG:ENOG410YFIREMBL:AC009853EMBL:BT002784
EMBL:BT004353EMBL:CP002686EnsemblPlants:AT3G07440EnsemblPlants:AT3G07440.1
entrez:819932GeneID:819932Gramene:AT3G07440.1hmmpanther:PTHR36031
hmmpanther:PTHR36031:SF1HOGENOM:HOG000090448IntAct:Q9SRS2KEGG:ath:AT3G07440
OMA:FEYDREKPhylomeDB:Q9SRS2Proteomes:UP000006548RefSeq:NP_187400.1
STRING:3702.AT3G07440.1TAIR:AT3G07440UniGene:At.40346UniProt:Q9SRS2
Coordinates (TAIR10) chr3:+:2381411..2382902
Molecular Weight (calculated) 28546.30 Da
IEP (calculated) 9.84
GRAVY (calculated) -1.44
Length 235 amino acids
Sequence (TAIR10)
(BLAST)
001: MNFVVRRVGS ILPSIRHGGV SQIRLARTEA GQPRRRNKLP SLPLKKKEEK SEWWIVDGEM HEIGDHVPPR ERFTIPRDNI PNKRRKQLRD QFMRRTRLVL
101: KESEHEPWCK KYMELYNELR ENWERLYWDE GYSKKLASDH ANYESAEEDD EDFNPYRNRR SFSDQTKEQG FNRTTQGDNW EKVSQIRDKF EYDRERRMRD
201: KAFAPMNAAP ESQESRDLNW NAQRRPFDPD RFARD
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)