AT3G51270.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : protein serine/threonine kinases;ATP binding;catalytics | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
protein serine/threonine kinases;ATP binding;catalytics; FUNCTIONS IN: protein serine/threonine kinase activity, catalytic activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RIO-like kinase (InterPro:IPR018934), RIO kinase (InterPro:IPR000687), RIO2 kinase, winged helix, N-terminal (InterPro:IPR015285), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Serine/threonine-protein kinase Rio1 (TAIR:AT2G24990.1); Has 12271 Blast hits to 8446 proteins in 803 species: Archae - 403; Bacteria - 1376; Metazoa - 3873; Fungi - 1548; Plants - 571; Viruses - 285; Other Eukaryotes - 4215 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:19033851..19036772 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 53023.40 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.96 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.71 | ||||||||||||||||||||||||||||||||||||||||
| Length | 461 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MKLDVNVLRY LSKDDFRVLT AVEMGMRNHE IVPSELVERI ACLKHGGTYK VLKNLLKYKL LHHDSSKYDG FRLTYLGYDF LAIKTLVNRG IFTGVGRQIG 101: VGKESDIFEV AQEDGTILAM KLHRLGRTSF RAVKSKRDYL RHRSSFSWLY LSRLAALKEF AFMKALEEHD FPVPKAIDCN RHCVIMSLVQ GYPMVQVKQL 201: QNPETIFEKI IGIVVRLAEH GLIHCDFNEF NIMIDDEEKI TMIDFPQMVS VSHRNAQMYF DRDIECIFKF FRKRFNMSFH EDKGESEETE VDENSRPSFF 301: DITKDANALD KDLEASGFTR KEQTDLDKFI EGGVEKSEDS DEDEESDDEE QTCESNEEGN LNEIKSLQLQ DKEQKSSDGV EAEVELDNTE NGESNGDEDE 401: VGSNEEEEEK EAELEKNLGK VRRRAMAAAR GRRKSQSSRN TYKDKGRGSQ NSKIHSNMSG F |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)