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AT1G32580.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : plastid developmental protein DAG, putative
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
plastid developmental protein DAG, putative; BEST Arabidopsis thaliana protein match is: plastid developmental protein DAG, putative (TAIR:AT2G35240.1); Has 256 Blast hits to 233 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 256; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IEVEeggNOG:ENOG410YAFMEMBL:AC055769EMBL:AY063995
EMBL:AY096695EMBL:CP002684EnsemblPlants:AT1G32580EnsemblPlants:AT1G32580.1
entrez:840152GeneID:840152Genevisible:Q9C7Y2GO:GO:0005739
GO:GO:0080156Gramene:AT1G32580.1hmmpanther:PTHR31346hmmpanther:PTHR31346:SF2
HOGENOM:HOG000272676IntAct:Q9C7Y2KEGG:ath:AT1G32580OMA:HDKTRYV
PaxDb:Q9C7Y2Pfam:Q9C7Y2PhylomeDB:Q9C7Y2PIR:D86451
PRIDE:Q9C7Y2PRO:PR:Q9C7Y2ProteinModelPortal:Q9C7Y2Proteomes:UP000006548
RefSeq:NP_174536.1STRING:3702.AT1G32580.1TAIR:AT1G32580UniGene:At.27111
UniProt:Q9C7Y2
Coordinates (TAIR10) chr1:+:11784108..11785430
Molecular Weight (calculated) 26025.90 Da
IEP (calculated) 9.46
GRAVY (calculated) -0.67
Length 229 amino acids
Sequence (TAIR10)
(BLAST)
001: MAKTLARSTA SRITKRLIST SGATTPSPSY ILSRRSTPVF SHAVGFISSL NRFTTIRTRM DRSGGSYSPL KSGSNFSDRA PTEMAPLFPG CDYEHWLIVM
101: DKPGGENATK QQMIDCYVQT LAKIIGSEEE AKKKIYNVSC ERYFGFGCEI DEETSNKLEG LPGVLFILPD SYVDQENKDY GAELFVNGEI VQRPPERQRK
201: IIELTTQRTN DKPKYHDKTR YVRRRENMR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)