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AT5G66860.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
ASURE: mitochondrion
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain; INVOLVED IN: translation; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Ribosomal protein L25, beta domain (InterPro:IPR020057), Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain (InterPro:IPR011035); BEST Arabidopsis thaliana protein match is: Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain (TAIR:AT4G23620.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
DNASU:836820eggNOG:ENOG410IJCUeggNOG:ENOG410YHV4EMBL:AB010700
EMBL:AY054545EMBL:AY064668EMBL:CP002688EnsemblPlants:AT5G66860
EnsemblPlants:AT5G66860.1entrez:836820Gene3D:2.170.120.20Gene3D:2.40.240.10
GeneID:836820GO:GO:0003735GO:GO:0004812GO:GO:0005739
GO:GO:0005840GO:GO:0006412GO:GO:0008097Gramene:AT5G66860.1
hmmpanther:PTHR33284hmmpanther:PTHR33284:SF2HOGENOM:HOG000238024InterPro:IPR011035
InterPro:IPR020056InterPro:IPR020057InterPro:IPR029751KEGG:ath:AT5G66860
KO:K02897OMA:CKIVATSPfam:PF01386Pfam:PF14693
PhylomeDB:Q9FKZ4Proteomes:UP000006548RefSeq:NP_201487.1SMR:Q9FKZ4
STRING:3702.AT5G66860.1SUPFAM:SSF50715TAIR:AT5G66860UniGene:At.24321
UniProt:Q9FKZ4
Coordinates (TAIR10) chr5:-:26701233..26702531
Molecular Weight (calculated) 27338.30 Da
IEP (calculated) 10.01
GRAVY (calculated) -0.12
Length 249 amino acids
Sequence (TAIR10)
(BLAST)
001: MAKWWRGLRS VTAEVADLPA SSFGRSIRCI HQYQTIQAIP REATGRGVSA RDRTIGRIPA VVFPQSLLDT DASKRGVSRK QLLTADKKQI KSIIDSVGLP
101: FFCSTTFQLQ IRAGQGSSTL VESGRVLPLK VHRDEETGKI LNLVFVWADD GEKLKVDVPV VFKGLDHCPG LQKGGNLRTI RSTLKLLGPA EHIPSKIEVD
201: VSNLDIEDKV LLQDVVFHPS LKLLSKNETM PVCKIVATSP VKEPEAVQA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)