AT1G21360.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:nucleus 0.967 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : glycolipid transfer protein 2 | ||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
glycolipid transfer protein 2 (GLTP2); FUNCTIONS IN: glycolipid transporter activity, glycolipid binding; INVOLVED IN: glycolipid transport; LOCATED IN: cytoplasm; CONTAINS InterPro DOMAIN/s: Glycolipid transfer protein, GLTP (InterPro:IPR014830); BEST Arabidopsis thaliana protein match is: Glycolipid transfer protein (GLTP) family protein (TAIR:AT3G21260.3); Has 509 Blast hits to 509 proteins in 154 species: Archae - 0; Bacteria - 0; Metazoa - 240; Fungi - 112; Plants - 114; Viruses - 0; Other Eukaryotes - 43 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr1:+:7481365..7483237 | ||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 25706.50 Da | ||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 7.34 | ||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.22 | ||||||||||||||||||||||||||||||||||||||||
Length | 223 amino acids | ||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MKRKRYEMEK KKKTEIQTAI EELSVFIVTK PADKTEATHI PLRPILSFCS LIIQVLDKIG PTMAVLRQDI DQNIQRLEKF YETDSCVYSN LAEILKKEKE 101: EGTSKMVASC GRALFWLTRT MDFTAGLLRL LSKEMSSKME ELVEECYMTT LKPHHGWIAS AAFKVCLKLV PDNKTFMEAI GARDESYDTL REDIDTLSSL 201: LTPILKEIYF VLEQYGLSRL RSM |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)