AT4G12330.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:endoplasmic reticulum 0.927 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : cytochrome P450, family 706, subfamily A, polypeptide 7 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
member of CYP706A | ||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
cytochrome P450, family 706, subfamily A, polypeptide 7 (CYP706A7); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 706, subfamily A, polypeptide 3 (TAIR:AT5G44620.1); Has 32880 Blast hits to 32631 proteins in 1648 species: Archae - 51; Bacteria - 3420; Metazoa - 11813; Fungi - 6994; Plants - 9311; Viruses - 3; Other Eukaryotes - 1288 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:-:7317776..7319658 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 58776.50 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.08 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.06 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 518 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MTDIFTFFTI QNRNDHFDFV LATIVISSVF WYIWVYVKSK RLFPPLPPGP RGLPIVGNLP FLHPELHTYF HSLAQKHGPV FKLWLGAKLT IVITSSEATR 101: DILRTNDVIF ANDDVPVAGS LSTYGGVDIV WSPYGPEWPM LRKICINKML SNATLDSNSF SALRRQETRR TVRYLADRAR AGLAVNVGEQ IFVTILNVVT 201: QMLWGETVAD DEEREKVGAE FLELITEIID VVGKPNVSDF FPVLSRFDLQ GLAKRVRRSA QRMDRMFDRI ISQRMGMDKG SKGNGGDFLM VLLNAKDEDE 301: NMSMNHVKAL LMDMVLGGTD TSLNTIEFAM AELINKLEIM KRAQQELDKV VGKNNIVEEK HITKLPYILS IMKETLRLHP ALPLLIPRCP SETTVIGGYT 401: IPNDSKVFIN VWAIHRNPNV WENPLEFNPD RFLDKGYDFS GNDYSYFPFG SGRRICAGMA MAEKVVLYNL ATLLHSFDWR IGEGEKVELE EKFGILLKLK 501: NPLVATPVLR LSDPNLFL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)