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AT1G44160.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 0.941
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : HSP40/DnaJ peptide-binding protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
HSP40/DnaJ peptide-binding protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: HSP40/DnaJ peptide-binding protein (TAIR:AT1G11040.1); Has 12682 Blast hits to 12678 proteins in 3092 species: Archae - 108; Bacteria - 7085; Metazoa - 1071; Fungi - 625; Plants - 733; Viruses - 2; Other Eukaryotes - 3058 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0484eggNOG:KOG0714EMBL:AK228168EMBL:CP002684
EnsemblPlants:AT1G44160EnsemblPlants:AT1G44160.1entrez:841019GeneID:841019
GO:GO:0006457Gramene:AT1G44160.1hmmpanther:PTHR24078hmmpanther:PTHR24078:SF266
HOGENOM:HOG000120699InterPro:IPR002939InterPro:IPR008971KEGG:ath:AT1G44160
KO:K09519OMA:TGCELSVPfam:PF01556PhylomeDB:Q0WRX5
Proteomes:UP000006548Reactome:R-ATH-3371453Reactome:R-ATH-3371568Reactome:R-ATH-3371571
Reactome:R-ATH-5687128RefSeq:NP_175080.2SMR:Q0WRX5STRING:3702.AT1G44160.1
SUPFAM:SSF49493TAIR:AT1G44160UniGene:At.17189UniGene:At.48278
UniProt:Q0WRX5
Coordinates (TAIR10) chr1:+:16795032..16796276
Molecular Weight (calculated) 40071.20 Da
IEP (calculated) 10.30
GRAVY (calculated) -0.68
Length 357 amino acids
Sequence (TAIR10)
(BLAST)
001: MATQGMAQPS AKKRSFLLRD LFKLCRSISR VLPRDKTKHH HKAKHDTKET KRLDEEHKRN TPNAFEFRET KGIGKNNKVE GVSLCKVRSY RFDNTNTNFV
101: GSKKSLSRSC SQNTATATST NPTLRSLSFI GRSKSSSNRM TESGGFMPTL MRSTTTVPRS FANPILYSSS SAKVAKPSPT EKKLRCTLEE LCNGCTKKIK
201: IKRDVITSLG EKCEEEEMVE IKVKPGWKGG TKVTFEGKGN EAMRSVPADL TFVIVEKEHE VFKREGDDLE MAVEVSLLEA LTGCELSVAL LDGDNMRLRI
301: EDVIHPGYVT VVQGKGMPNL KEKGKRGDLR VRFRTKFPQH LTDEQRAEIH SILQDSS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)