AT3G45410.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:plasma membrane 1.000 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : Concanavalin A-like lectin protein kinase family protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
encodes a receptor-like kinase that has serine/threonine kinase activity whose expression is induced by high salt stress. This induction is inhibited by tobacco ethylene receptor. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Computational Description (TAIR10) |
Concanavalin A-like lectin protein kinase family protein; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Concanavalin A-like lectin protein kinase family protein (TAIR:AT3G45420.1); Has 116067 Blast hits to 114719 proteins in 4346 species: Archae - 94; Bacteria - 13482; Metazoa - 41990; Fungi - 9850; Plants - 33853; Viruses - 377; Other Eukaryotes - 16421 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr3:-:16654019..16656013 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 73913.80 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 7.75 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | 0.02 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Length | 664 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MACRLYLALI FSCVYLICLS SQQETGFVYN GFEQADLFID GIAKILPDGL LQLTNTTELQ MGHAFFKKPF DFDPSSSLSF YTHFVCALVP PKLGADGGHG 101: IVFVVSPSID LSHAYATQYL GVFSNLTNGT SSSHLLAIEL DTVKTVEFNE LEKPHVGIDL NSPISVESAL PSYFSNALGK NISINLLSGE PIQVWVDYDG 201: SFLNVTLAPI EIKKPNQPLI SRAINLSEIF QEKMYVGFSS STGNLLSNHY ILGWSFSRRK EQLQSLNLST LPRVPLPKEE KKKLSPLLIG LVILLVIPVV 301: MVLGGVYWYR RKKYAEVKEW WEKEYGPHRF SYKSLYKATN GFRKDCRVGK GGFGEVYKGT LPGGRHIAVK RLSHDAEQGM KQFVAEVVTM GNLQHRNLVP 401: LLGYCRRKCE LLLVSEYMPN GSLDQYLFHE GNPSPSWYQR ISILKDIASA LSYLHTGTKQ VVLHRDIKAS NVMLDSEFNG RLGDFGMAKF HDRGTNLSAT 501: AAVGTIGYMA PELITMGTSM KTDVYAFGAF LLEVICGRRP VEPELPVGKQ YLVKWVYECW KEACLFKTRD PRLGVEFLPE EVEMVLKLGL LCTNAMPESR 601: PAMEQVVQYL NQDLPLPIFS PSTPGIGAFM PVSMEALSAI GVSSVRNSSV SMFVTHTILD GHGR |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)