AT4G15400.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:cytosol 0.610 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : HXXXD-type acyl-transferase family protein | ||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT5G47980.1); Has 2123 Blast hits to 2120 proteins in 128 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 33; Plants - 2088; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr4:-:8812121..8813428 | ||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 48025.30 Da | ||||||||||||||||||||||||||||||||||||
IEP (calculated) | 4.59 | ||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.03 | ||||||||||||||||||||||||||||||||||||
Length | 435 amino acids | ||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MEAKLEVTGK EVIKPASPSP RDRLQLSILD LYCPGIYVST IFFYDLITES SEVFSENLKL SLSETLSRFY PLAGRIEGLS ISCNDEGAVF TEARTDLLLP 101: DFLRNLNTDS LSGFLPTLAA GESPAAWPLL SVKVTFFGSG SGVAVSVSVS HKICDIASLV TFVKDWATTT AKGKSNSTIE FAETTIYPPP PSHMYEQFPS 201: TDSDSNITSK YVLKRFVFEP SKIAELKHKA ASESVPVPTR VEAIMSLIWR CARNSSRSNL LIPRQAVMWQ AMDIRLRIPS SVAPKDVIGN LQSGFSLKKD 301: AESEFEIPEI VATFRKNKER VNEMIKESLQ GNTIGQSLLS LMAETVSEST EIDRYIMSSW CRKPFYEVDF GSGSPVWVGY ASHTIYDNMV GVVLIDSKEG 401: DGVEAWISLP EEDMSVFVDD QELLAYAVLN PPVVA |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)