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AT4G15390.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
vacuole 0.428
plasma membrane 0.376
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:26572690 (2016): extracellular region plant-type cell wall
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : HXXXD-type acyl-transferase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT3G30280.1); Has 2282 Blast hits to 2273 proteins in 132 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 35; Plants - 2239; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G15390-MONOMEREMBL:AL161541EMBL:AY099752EMBL:AY128867
EMBL:CP002687EMBL:Z97338EnsemblPlants:AT4G15390EnsemblPlants:AT4G15390.1
entrez:827205Gene3D:3.30.559.10GeneID:827205GO:GO:0016747
Gramene:AT4G15390.1hmmpanther:PTHR31623hmmpanther:PTHR31623:SF15InterPro:IPR003480
InterPro:IPR023213KEGG:ath:AT4G15390OMA:NMSSFEQPfam:PF02458
PhylomeDB:O23392PIR:D71418Proteomes:UP000006548RefSeq:NP_193274.1
SMR:O23392STRING:3702.AT4G15390.1TAIR:AT4G15390UniGene:At.26884
UniGene:At.68707UniGene:At.74010UniProt:O23392
Coordinates (TAIR10) chr4:-:8792941..8794281
Molecular Weight (calculated) 48770.40 Da
IEP (calculated) 4.83
GRAVY (calculated) -0.01
Length 446 amino acids
Sequence (TAIR10)
(BLAST)
001: METMTMKVET ISKEIIKPSS PTPNNLQTLQ LSIYDHILPP VYTVAFLFYT KNDLISQEHT SHKLKTSLSE TLTKFYPLAG RITGVTVDCT DEGAIFVDAR
101: VNNCPLTEFL KCPDFDALQQ LLPLDVVDNP YVAAATWPLL LVKATYFGCG GMAIGICITH KIADAASIST FIRSWAATAR GENDAAAMES PVFAGANFYP
201: PANEAFKLPA DEQAGKRSSI TKRFVFEASK VEDLRTKAAS EETVDQPTRV ESVTALIWKC FVASSKTTTC DHKVLVQLAN LRSKIPSLLQ ESSIGNLMFS
301: SVVLSIGRGG EVKIEEAVRD LRKKKEELGT VILDEGGSSD SSSMIGSKLA NLMLTNYSRL SYETHEPYTV SSWCKLPLYE ASFGWDSPVW VVGNVSPVLG
401: NLAMLIDSKD GQGIEAFVTL PEENMSSFEQ NPELLAFATM NPSVLV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)