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AT4G26220.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 0.999
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:25402197 (2015): plastid plastid thylakoid plastid thylakoid membrane
  • PMID:21166475 (2011): cytosol
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: O-methyltransferase activity; LOCATED IN: cytosol; EXPRESSED IN: shoot, inflorescence meristem, root, flower; EXPRESSED DURING: petal differentiation and expansion stage, seed development stages; CONTAINS InterPro DOMAIN/s: O-methyltransferase, family 3 (InterPro:IPR002935); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G34050.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G26220-MONOMERBioCyc:MetaCyc:AT4G26220-MONOMEREC:2.1.1.104eggNOG:COG4122
eggNOG:KOG1663EMBL:AF360317EMBL:AL049171EMBL:AL161564
EMBL:AY056313EMBL:AY087244EMBL:CP002687EnsemblPlants:AT4G26220
EnsemblPlants:AT4G26220.1entrez:828728Gene3D:3.40.50.150GeneID:828728
Genevisible:Q9C5D7GO:GO:0005829GO:GO:0009809GO:GO:0042409
GO:GO:0046872Gramene:AT4G26220.1gramene_pathway:2.1.1.104gramene_pathway:PWY-1121
gramene_pathway:PWY-361gramene_pathway:PWY4FS-9hmmpanther:PTHR10509hmmpanther:PTHR10509:SF29
HOGENOM:HOG000016839InParanoid:Q9C5D7InterPro:IPR002935InterPro:IPR029063
KEGG:ath:AT4G26220KO:K00588OMA:YHERLIRPaxDb:Q9C5D7
Pfam:PF01596Pfam:Q9C5D7Pfscan:PS51682PhylomeDB:Q9C5D7
PIR:T06006PRIDE:Q9C5D7PRO:PR:Q9C5D7PROSITE:PS51682
ProteinModelPortal:Q9C5D7Proteomes:UP000006548RefSeq:NP_567739.1SMR:Q9C5D7
STRING:3702.AT4G26220.1SUPFAM:SSF53335TAIR:AT4G26220UniGene:At.2883
UniPathway:UPA00711UniProt:Q9C5D7
Coordinates (TAIR10) chr4:+:13284179..13285146
Molecular Weight (calculated) 25947.30 Da
IEP (calculated) 5.19
GRAVY (calculated) -0.23
Length 232 amino acids
Sequence (TAIR10)
(BLAST)
001: MAKDEAKGLL KSEELYKYIL ETSVYPREPE VLRELRNITH NHPQAGMATA PDAGQLMGML LNLVNARKTI EVGVFTGYSL LLTALTLPED GKVIAIDMNR
101: DSYEIGLPVI KKAGVEHKID FKESEALPAL DELLNNKVNE GGFDFAFVDA DKLNYWNYHE RLIRLIKVGG IIVYDNTLWG GSVAEPDSST PEWRIEVKKA
201: TLELNKKLSA DQRVQISQAA LGDGITICRR LY
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)